RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SSX5O60225 188 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 CELA2AP08217 269 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 NMBP08949 121 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 NAT2P11245 290 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 FCGR2AP12318 317 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 NOVA1P51513 510 aaKnown RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 RPS18P62269 152 aaKnown RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 CHRFAM7AQ494W8 412 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 RGS7BPQ6MZT1 257 aaPredicted RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 ALKAL2Q6UX46 152 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 CSNK2A3Q8NEV1 391 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 ST8SIA2Q92186 375 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 ZNF385AQ96PM9 386 aaKnown RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 NICN1Q9BSH3 213 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 DNTTIP1Q9H147 329 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 PPA2Q9H2U2 334 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 BANF2Q9H503 90 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 PROK2Q9HC23 129 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 RAB18Q9NP72 206 aa10.73□□□□□ -0.69
UBR4-203ENST00000375225 BOKQ9UMX3 212 aaPredicted RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
UBR4-203ENST00000375225 MFSD2BA6NFX1 497 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 SOCS1O15524 211 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 FARS2O95363 451 aaKnown RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 SFT2D2O95562 160 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 CSTBP04080 98 aaKnown RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 SERPINA7P05543 415 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 BLVRBP30043 206 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 EIF5AP63241 154 aaKnown RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 MICBQ29980 383 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 RIPPLY2Q5TAB7 128 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 ZNF660Q6AZW8 331 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 LHFPL2Q6ZUX7 228 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 KCTD9Q7L273 389 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 ASCL5Q7RTU5 278 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 AAED1Q7RTV5 226 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 PPP1R32Q7Z5V6 425 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 LRRC18Q8N456 261 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 EIF4E3Q8N5X7 224 aaKnown RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 TMEM104Q8NE00 496 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 OR2V1Q8NHB1 315 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 CASTOR1Q8WTX7 329 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 ST8SIA4Q92187 359 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 EMG1Q92979 244 aaKnown RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 CPNE4Q96A23 557 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 POM121Q96HA1 1249 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 ARHGAP5-AS1Q96IT6 56 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 C1orf147Q96MC9 270 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 SPACA5Q96QH8 159 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 VRK1Q99986 396 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 ARPC5LQ9BPX5 153 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
UBR4-203ENST00000375225 ZNF319Q9P2F9 582 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 GPR132Q9UNW8 380 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
UBR4-203ENST00000375225 OR5H15A6NDH6 313 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 WIPF3A6NGB9 483 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 ZSCAN5BA6NJL1 495 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 OR2AT4A6NND4 320 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 SPDEFO95238 335 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 POU3F2P20265 443 aaPredicted RBP10.71□□□□□ -0.69
UBR4-203ENST00000375225 PSMB6P28072 239 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 CYB561P49447 251 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 STK11Q15831 433 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 NRN1LQ496H8 165 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 PLAC9Q5JTB6 97 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 SFRP5Q5T4F7 317 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 H3F3CQ6NXT2 135 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 JMJD6Q6NYC1 403 aaPredicted RBP10.71□□□□□ -0.69
UBR4-203ENST00000375225 C17orf107Q6ZR85 190 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 OVCH2Q7RTZ1 564 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 PXT1Q8NFP0 134 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 MARCH1Q8TCQ1 289 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 LYZL4Q96KX0 146 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 IP6K3Q96PC2 410 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 PECRQ9BY49 303 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 CHMP1AQ9HD42 196 aaPredicted RBP10.71□□□□□ -0.69
UBR4-203ENST00000375225 B4GALT7Q9UBV7 327 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
UBR4-203ENST00000375225 TIMM10BQ9Y5J6 103 aa10.71□□□□□ -0.69
UBR4-203ENST00000375225 KIAA1549Q9HCM3 1950 aa10.71□□□□□ -0.7
UBR4-203ENST00000375225 EP300Q09472 2414 aaPredicted RBP10.7□□□□□ -0.7
UBR4-203ENST00000375225 PTPRBP23467 1997 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 A0A0A6YYD4 124 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 IGHV3-15A0A0B4J1V0 119 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 IGKV1-9A0A0C4DH69 117 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 SMAD9O15198 467 aaKnown RBP10.7□□□□□ -0.7
UBR4-203ENST00000375225 FAHP16930 419 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 SERPINA2P20848 420 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 CNR1P21554 472 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
UBR4-203ENST00000375225 RSU1Q15404 277 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 HYAL4Q2M3T9 481 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 SULF2Q8IWU5 870 aa10.7□□□□□ -0.7
UBR4-203ENST00000375225 ZNF100Q8IYN0 542 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms