RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 USF1P22415 310 aaPredicted RBP12.87□□□□□ -0.35
PFDN6-202ENST00000374607 GIFP27352 417 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 GATA4P43694 442 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 MAP2K4P45985 399 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 MPPED2Q15777 294 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 SERPINA12Q8IW75 414 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 OR5M11Q96RB7 305 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 CHST5Q9GZS9 411 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 RNF7Q9UBF6 113 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 LRRC42Q9Y546 428 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 NPTNQ9Y639 398 aa12.87□□□□□ -0.35
PFDN6-202ENST00000374607 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
PFDN6-202ENST00000374607 CDIPTO14735 213 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 MAGEB3O15480 346 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 RP2O75695 350 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 THBS2P35442 1172 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 FUT6P51993 359 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 CHN2P52757 468 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 RIN1Q13671 783 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 IRF3Q14653 427 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 DMKNQ6E0U4 476 aaPredicted RBP12.86□□□□□ -0.35
PFDN6-202ENST00000374607 DNM1P46Q6ZS02 220 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 Q6ZSR3 168 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF485Q8NCK3 441 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 RPL3LQ92901 407 aaKnown RBP12.86□□□□□ -0.35
PFDN6-202ENST00000374607 ADAT3Q96EY9 351 aaPredicted RBP12.86□□□□□ -0.35
PFDN6-202ENST00000374607 GAL3ST1Q99999 423 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 LRCH1Q9Y2L9 728 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 WIPI2Q9Y4P8 454 aa12.86□□□□□ -0.35
PFDN6-202ENST00000374607 CELSR1Q9NYQ6 3014 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PPIAL4EA0A075B759 164 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PPIAL4DF5H284 164 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TMEM178BH3BS89 294 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PLPP2O43688 288 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 HCKP08631 526 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PPIAL4FP0DN26 164 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PRKACBP22694 351 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 HAAOP46952 286 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 ATP1B3P54709 279 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PPP3R1P63098 170 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF154Q13106 437 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF181Q2M3W8 571 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 LIPKQ5VXJ0 399 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TMEM42Q69YG0 159 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 MAPK1IP1LQ8NDC0 245 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 HPSE2Q8WWQ2 592 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 THRSPQ92748 146 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 PPIAL4AQ9Y536 164 aa12.85□□□□□ -0.35
PFDN6-202ENST00000374607 MTORP42345 2549 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF205O95201 554 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 CYB5AP00167 134 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ATF1P18846 271 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 RAB3AP20336 220 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 GMFBP60983 142 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 BTG1P62324 171 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 MLLT11Q13015 90 aaPredicted RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 KCNJ8Q15842 424 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 Q499Y3 187 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 HAGHLQ6PII5 290 aaPredicted RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF773Q6PK81 442 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ZNF826PQ6ZT77 177 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 KRT74Q7RTS7 529 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 MUC20Q8N307 709 aaPredicted RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 MS4A15Q8N5U1 240 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 SCCPDHQ8NBX0 429 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 Q8TCH9 128 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 FCGR1BQ92637 280 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 CPNE2Q96FN4 548 aaPredicted RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 C18orf12Q96KH6 178 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 MGLLQ99685 303 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 VCX3AQ9NNX9 186 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ISYNA1Q9NPH2 558 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
PFDN6-202ENST00000374607 DYSFO75923 2080 aa12.84□□□□□ -0.35
PFDN6-202ENST00000374607 ARID1AO14497 2285 aa12.83□□□□□ -0.35
PFDN6-202ENST00000374607 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms