RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CACNA1CQ13936 2221 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 SCN3AQ9NY46 2000 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 A6NNC1 897 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 K7EQS6 105 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 DLL1O00548 723 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 GPR137BO60478 399 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 LILRB3O75022 631 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 EFEMP2O95967 443 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 FUT3P21217 361 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 MMP16P51512 607 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF117Q03924 483 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 CLN3Q13286 438 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 SMAD4Q13485 552 aaKnown RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 HERPUD1Q15011 391 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 SPSB3Q6PJ21 355 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 FOXN4Q96NZ1 517 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
PRPF4-201ENST00000374198 TMEM74BQ9NUR3 256 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 MYOTQ9UBF9 498 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 INSL5Q9Y5Q6 135 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 LIPGQ9Y5X9 500 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 V9GYS6 101 aa11.42□□□□□ -0.58
PRPF4-201ENST00000374198 REV3LO60673 3130 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 LOC107986453A0A1B0GWG9 222 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 A6NIZ1 184 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 TP53I11O14683 189 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 IGKV1D-16P01601 117 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 CT62P0C5K7 136 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 OR3A1P47881 315 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 RAP1BP61224 184 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 BTG2P78543 158 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 HLA-DRB3P79483 266 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 DMRTA1Q5VZB9 504 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 TEX38Q6PEX7 206 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 VN1R4Q7Z5H5 301 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 COX14Q96I36 57 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 SPOCK3Q9BQ16 436 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 NICN1Q9BSH3 213 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 KIAA1456Q9P272 454 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 RCL1Q9Y2P8 373 aaKnown RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 WSB1Q9Y6I7 421 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 TMEM210A6NLX4 147 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 KNG1P01042 644 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 IFNA21P01568 189 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 HSPB1P04792 205 aaKnown RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 FOLR1P15328 257 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 PTGER4P35408 488 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 RPL18Q07020 188 aaKnown RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 ICAM4Q14773 271 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 PRICKLE4Q2TBC4 344 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 DEFB134Q4QY38 66 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 GPR157Q5UAW9 335 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 KCTD18Q6PI47 426 aaPredicted RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 C9orf40Q8IXQ3 194 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 C12orf76Q8N812 135 aaPredicted RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 LIPHQ8WWY8 451 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 EMG1Q92979 244 aaKnown RBP11.41□□□□□ -0.58
PRPF4-201ENST00000374198 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 DAPP1Q9UN19 280 aa11.41□□□□□ -0.58
PRPF4-201ENST00000374198 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 CLDN34H7C241 214 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 APODP05090 189 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 ASAH2BP0C7U1 165 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 EMP2P54851 167 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 BPIFB3P59826 476 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 MGAT2Q10469 447 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 MARCH3Q86UD3 253 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF573Q86YE8 665 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF283Q8N7M2 679 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 OR8G5Q8NG78 346 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 OR52N4Q8NGI2 321 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 POC1BQ8TC44 478 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 C8orf44Q96CB5 159 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 KTI12Q96EK9 354 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 SDCBPO00560 298 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 FGF17O60258 216 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 GSTP1P09211 210 aaKnown RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 PEBP1P30086 187 aaKnown RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 IQCJQ1A5X6 159 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 COX15Q7KZN9 410 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 DNASE2BQ8WZ79 361 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 MRPL24Q96A35 216 aaKnown RBP11.4□□□□□ -0.58
PRPF4-201ENST00000374198 SERINC2Q96SA4 455 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 RAB11FIP5Q9BXF6 653 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 OR8D2Q9GZM6 311 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms