RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 WDR13Q9H1Z4 485 aa17.93■□□□□ 0.46
CCDC28B-201ENST00000373602 CNTD2Q9H8S5 307 aa17.93■□□□□ 0.46
CCDC28B-201ENST00000373602 NUFIP1Q9UHK0 495 aaKnown RBP17.93■□□□□ 0.46
CCDC28B-201ENST00000373602 GPR37O15354 613 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 FCGR1AP12314 374 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 ZNF322Q6U7Q0 402 aaPredicted RBP17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 OR51E1Q8TCB6 317 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 LRTOMTQ8WZ04 291 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 PPP1R14AQ96A00 147 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 DMRTB1Q96MA1 342 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 MNTQ99583 582 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 DNTTIP1Q9H147 329 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 ADGRL4Q9HBW9 690 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 NOX4Q9NPH5 578 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 GPR84Q9NQS5 396 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 DNAJB11Q9UBS4 358 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 ENOPH1Q9UHY7 261 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 IKZF2Q9UKS7 526 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 KPTNQ9Y664 436 aa17.92■□□□□ 0.46
CCDC28B-201ENST00000373602 HOXA3O43365 443 aaPredicted RBP17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 AKR7A2O43488 359 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 NDUFB3O43676 98 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 SRSF10O75494 262 aaKnown RBP17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 GPM6AP51674 278 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 GMFBP60983 142 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 CXCR4P61073 352 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 GNG3P63215 75 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 MFGE8Q08431 387 aaPredicted RBP17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 RIPPLY1Q0D2K3 151 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 CEACAM21Q3KPI0 293 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 ZBTB37Q5TC79 503 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 C16orf87Q6PH81 154 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 Q6YL49 198 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 THAP5Q7Z6K1 395 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 COMMD2Q86X83 199 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 SLC35F2Q8IXU6 374 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 OR5T2Q8NGG2 359 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 GATAD2BQ8WXI9 593 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 FAM71F1Q96KD3 344 aaPredicted RBP17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 IL4I1Q96RQ9 567 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 ZNF747Q9BV97 191 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 OR51I2Q9H344 312 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 SNTG1Q9NSN8 517 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 PCDHGB1Q9Y5G3 927 aa17.91■□□□□ 0.46
CCDC28B-201ENST00000373602 IGHV1-69DA0A0B4J2H0 117 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 ZNF732B4DXR9 585 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 IGHV1-69P01742 117 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 TTRP02766 147 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 IKZF1Q13422 519 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 CDONQ4KMG0 1287 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 LRRC10Q5BKY1 277 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 CEP78Q5JTW2 689 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 ZNF788Q6ZQV5 615 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 GID4Q8IVV7 300 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 OR5A2Q8NGI9 324 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 SGMS2Q8NHU3 365 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 ANGPTL6Q8NI99 470 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 LHX4Q969G2 390 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 CIB1Q99828 191 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 APOL4Q9BPW4 351 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 CLN6Q9NWW5 311 aa17.9■□□□□ 0.46
CCDC28B-201ENST00000373602 NKX6-3A6NJ46 265 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 OR5B21A6NL26 309 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 RHBDL1O75783 438 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 SELLP14151 372 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 ACTR3P61158 418 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 EGR3Q06889 387 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 MOB3CQ70IA8 216 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 GAFA1Q96PS6 74 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 DCTN5Q9BTE1 182 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 MOB1AQ9H8S9 216 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 ACOXLQ9NUZ1 547 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 NLKQ9UBE8 527 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 ENPP5Q9UJA9 477 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 PIGLQ9Y2B2 252 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 R4GMQ9 66 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 NBEAL1Q6ZS30 2694 aa17.89■□□□□ 0.45
CCDC28B-201ENST00000373602 ZNF670-ZNF695F2Z2N8 137 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 LOC110117498-PIK3R3F6TDL0 507 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 MAGEB4O15481 346 aaPredicted RBP17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 DHRS3O75911 302 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 FAHP16930 419 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 GLRA1P23415 457 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 IL13RA1P78552 427 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 VMO1Q7Z5L0 202 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 ELMOD2Q8IZ81 293 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 TMEM86BQ8N661 226 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 C8orf46Q8TAG6 207 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 CENPNQ96H22 339 aaPredicted RBP17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 MED30Q96HR3 178 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 SEMA6AQ9H2E6 1030 aa17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 MRM2Q9UI43 246 aaKnown RBP17.88■□□□□ 0.45
CCDC28B-201ENST00000373602 A0A1B0GVI7 797 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 MTRF1O75570 445 aaKnown RBP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 MELTFP08582 738 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 ACAA1P09110 424 aaPredicted RBP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 POLR2IP36954 125 aaKnown RBP17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 DGUOKQ16854 277 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 DMRTC1Q5HYR2 192 aa17.87■□□□□ 0.45
CCDC28B-201ENST00000373602 PLCXD3Q63HM9 321 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms