RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 OR51B4Q9Y5P0 310 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ABCD4O14678 606 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 DSCR3O14972 297 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 SMAD2Q15796 467 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 MFSD12Q6NUT3 480 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRICKLE2Q7Z3G6 844 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 SMOC1Q9H4F8 434 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 OBP2BQ9NPH6 170 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 B4DEV8 164 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 M0R3E3 92 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 MDH2P40926 338 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 CLDN17P56750 224 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZNF740Q8NDX6 193 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ISL2Q96A47 359 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 LYRM4Q9HD34 91 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 PSENENQ9NZ42 101 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 KLF13Q9Y2Y9 288 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ERVS71-1P61550 626 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 DLK1P80370 383 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 RELQ04864 619 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 C11orf87Q6NUJ2 197 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 LYG2Q86SG7 212 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 BCL2L2Q92843 193 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 DEFB127Q9H1M4 99 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 CACFD1Q9UGQ2 172 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 CST4P01036 141 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 POLR2IP36954 125 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 PMP22Q01453 160 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 ABHD17CQ6PCB6 329 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR5M11Q96RB7 305 aa12.7□□□□□ -0.38
RAPGEF1-202ENST00000372190 KIR2DS1A0A191URI9 304 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 EIF3IQ13347 325 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 PRSS36Q5K4E3 855 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 NXNL2Q5VZ03 156 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 BAHD1Q8TBE0 780 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 A0A1W2PPC1 479 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 SERINC4A6NH21 518 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 IDSB3KWA1 339 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 NPPBP16860 134 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 EIF1P41567 113 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 OTUD1Q5VV17 481 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 TEX101Q9BY14 249 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 COL4A5P29400 1685 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 MYO5AQ9Y4I1 1855 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 SPINT2O43291 252 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 LIMS3P0CW19 117 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 LIMS4P0CW20 117 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 SLC6A1P30531 599 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZNF93P35789 620 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 PFN3P60673 137 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 ELAVL1Q15717 326 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 MRPL2Q5T653 305 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 LINC00052Q96N35 136 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 UQCR10Q9UDW1 63 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR5B21A6NL26 309 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 WNT11O96014 354 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 CRYBA1P05813 215 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 CEACAM5P06731 702 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 EPHA2P29317 976 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 SRSF5Q13243 272 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 LRRC18Q8N456 261 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 EMG1Q92979 244 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
RAPGEF1-202ENST00000372190 TRGV8A0A0C4DH27 118 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR2W5A6NFC9 320 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 ST6GAL1P15907 406 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 BCL3P20749 454 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 UQCRFS1P47985 274 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 OR52I1Q8NGK6 324 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 TM4SF18Q96CE8 201 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 RHOVQ96L33 236 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 NAGKQ9UJ70 344 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 BMI1P35226 326 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 GNG4P50150 75 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 GP2P55259 537 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 ZXDAP98168 799 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 LEUTXA8MZ59 168 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 ALOX5APP20292 161 aa12.68□□□□□ -0.38
RAPGEF1-202ENST00000372190 GFERP55789 205 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms