RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ADGRG3Q86Y34 549 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 RFESDQ8TAC1 157 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 M0QZ24 198 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 PNLIPRP3Q17RR3 467 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 FAAP20Q6NZ36 180 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 ST8SIA5O15466 376 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 SELENOPP49908 381 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 ELLP55199 621 aaPredicted RBP13.1□□□□□ -0.31
NDC1-201ENST00000371429 SKP2Q13309 424 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 OR8U1Q8NH10 309 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 RPEQ96AT9 228 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 AP1S3Q96PC3 154 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 TAAR6Q96RI8 345 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 PLEKHB1Q9UF11 243 aaPredicted RBP13.1□□□□□ -0.31
NDC1-201ENST00000371429 OSGIN2Q9Y236 505 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 TMEM127O75204 238 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 PIGPP57054 158 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 TGIF1Q15583 401 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 CD300LDQ6UXZ3 194 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 MEX3AA1L020 520 aaKnown RBP13.09□□□□□ -0.31
NDC1-201ENST00000371429 HLA-DOBP13765 273 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 MPGP29372 298 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 LSMEM1Q8N8F7 131 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 OR10P1Q8NGE3 313 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 ASB10Q8WXI3 467 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 NTMQ9P121 344 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 C16orf97H3BN30 126 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 ADAM20O43506 726 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 OR5G3P0C626 314 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 FGF5P12034 268 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 ZNF721Q8TF20 911 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 TTTY12Q9BZ98 90 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 M0R1X1 148 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 CLN5O75503 358 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 S100A11P31949 105 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 HABP2Q14520 560 aaPredicted RBP13.09□□□□□ -0.31
NDC1-201ENST00000371429 ETFDHQ16134 617 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 UCN2Q96RP3 112 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 MRPS18BQ9Y676 258 aaKnown RBP13.09□□□□□ -0.31
NDC1-201ENST00000371429 SCN3AQ9NY46 2000 aa13.09□□□□□ -0.31
NDC1-201ENST00000371429 XRCC3O43542 346 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 OR10J4P0C629 311 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 PTGFRP43088 359 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 VMA21Q3ZAQ7 101 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 STUMQ69YW2 141 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 SLC51BQ86UW2 128 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 FAM122AQ96E09 287 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 ADGRL4Q9HBW9 690 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 CCL27Q9Y4X3 112 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 PUS1Q9Y606 427 aaKnown RBP eCLIP13.08□□□□□ -0.32
NDC1-201ENST00000371429 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
NDC1-201ENST00000371429 CSN1S1P47710 185 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 UBE2KP61086 200 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 TMEM230Q96A57 120 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 CIB3Q96Q77 187 aaPredicted RBP13.08□□□□□ -0.32
NDC1-201ENST00000371429 MPC1Q9Y5U8 109 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 LRP3O75074 770 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 UQCC2Q9BRT2 126 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
NDC1-201ENST00000371429 GNG10P50151 68 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 DHODHQ02127 395 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 ASAH1Q13510 395 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 CHST6Q9GZX3 395 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 DTX4Q9Y2E6 619 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 STRAPQ9Y3F4 350 aaKnown RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 hADV38S2A0JD32 116 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 ZNF354AO60765 605 aaPredicted RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 LTBRP36941 435 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 PSMB3P49720 205 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 ZNF816Q0VGE8 651 aaPredicted RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 CACFD1Q9UGQ2 172 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 MN1Q10571 1320 aaPredicted RBP13.07□□□□□ -0.32
NDC1-201ENST00000371429 SNAPINO95295 136 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 ZBTB25P24278 435 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 DCTDP32321 178 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 CDONQ4KMG0 1287 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 C20orf196Q8IYI0 205 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 LYG1Q8N1E2 194 aa13.07□□□□□ -0.32
NDC1-201ENST00000371429 OR5D13Q8NGL4 314 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms