RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 OR51V1Q9H2C8 321 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 ELL3Q9HB65 397 aaPredicted RBP8.47□□□□□ -1.05
CLRN3-201ENST00000368671 ARL8BQ9NVJ2 186 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 VNN3Q9NY84 501 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 SLC25A10Q9UBX3 287 aaPredicted RBP8.47□□□□□ -1.05
CLRN3-201ENST00000368671 MPC1Q9Y5U8 109 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 CMYA5Q8N3K9 4069 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
CLRN3-201ENST00000368671 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
CLRN3-201ENST00000368671 TMEM210A6NLX4 147 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 H3BN98 237 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 H3BUX3 64 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 GLCEO94923 617 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 OPRL1P41146 370 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 MAGEA2P43356 314 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 GABRA2P47869 451 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 BLMHQ13867 455 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 LY6EQ16553 131 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 MICAQ29983 383 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 ATPAF1Q5TC12 328 aaPredicted RBP8.46□□□□□ -1.06
CLRN3-201ENST00000368671 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 SLC35E4Q6ICL7 350 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 ZNF788Q6ZQV5 615 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 CPLX4Q7Z7G2 160 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 TIGD4Q8IY51 512 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 OR5R1Q8NH85 324 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 THEM6Q8WUY1 208 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 OR5P3Q8WZ94 311 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 TNFRSF14Q92956 283 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 MED30Q96HR3 178 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 RNF170Q96K19 258 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 NIPSNAP1Q9BPW8 284 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 FGF23Q9GZV9 251 aaPredicted RBP8.46□□□□□ -1.06
CLRN3-201ENST00000368671 DNTTIP1Q9H147 329 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 RGCCQ9H4X1 137 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 REEP1Q9H902 201 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 CMC2Q9NRP2 79 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 NDE1Q9NXR1 346 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 TAS2R1Q9NYW7 299 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 NLKQ9UBE8 527 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.06
CLRN3-201ENST00000368671 SAMHD1Q9Y3Z3 626 aaKnown RBP8.46□□□□□ -1.06
CLRN3-201ENST00000368671 TCRBV5S2A0A599 114 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 M0R1W7 72 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 SELENOFO60613 162 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 LYNP07948 512 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 H2AFB2P0C5Z0 115 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 GLRA1P23415 457 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 ACKR3P25106 362 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 GABRA5P31644 462 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 UBE2E1P51965 193 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 C1orf122Q6ZSJ8 110 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 ZDHHC23Q8IYP9 409 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 FAM185AQ8N0U4 392 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 C11orf44Q8N8P7 122 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 TMEM185AQ8NFB2 350 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 OR10G2Q8NGC3 310 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 OR8B12Q8NGG6 310 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 ANGPTL6Q8NI99 470 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 HPSE2Q8WWQ2 592 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 DUS3LQ96G46 650 aaKnown RBP8.45□□□□□ -1.06
CLRN3-201ENST00000368671 LYZL4Q96KX0 146 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 HIST1H2AAQ96QV6 131 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 DGCR6LQ9BY27 220 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 MAGIXQ9H6Y5 334 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 METTL8Q9H825 291 aaKnown RBP8.45□□□□□ -1.06
CLRN3-201ENST00000368671 ABCB9Q9NP78 766 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 ACTR3BQ9P1U1 418 aa8.45□□□□□ -1.06
CLRN3-201ENST00000368671 OR2AT4A6NND4 320 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 PRR23D1E9PI22 279 aaPredicted RBP8.44□□□□□ -1.06
CLRN3-201ENST00000368671 H0YAE9 185 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 SIGLEC5O15389 551 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 ANGPTL7O43827 346 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 RHBDL1O75783 438 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 CST4P01036 141 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 ACAA1P09110 424 aaPredicted RBP8.44□□□□□ -1.06
CLRN3-201ENST00000368671 PRR23D2P0DMB1 279 aaPredicted RBP8.44□□□□□ -1.06
CLRN3-201ENST00000368671 PAICSP22234 425 aaKnown RBP8.44□□□□□ -1.06
CLRN3-201ENST00000368671 GPM6AP51674 278 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 CAV3P56539 151 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 ACSM1Q08AH1 577 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 HERPUD1Q15011 391 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 SPATS1Q496A3 300 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 CEP78Q5JTW2 689 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 PLBD1Q6P4A8 553 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 Q6ZTK2 550 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 ZNRF1Q8ND25 227 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 PAPD5Q8NDF8 572 aaKnown RBP8.44□□□□□ -1.06
CLRN3-201ENST00000368671 BEND2Q8NDZ0 799 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 OTOSQ8NHW6 89 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 FAM81AQ8TBF8 368 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 C17orf50Q8WW18 174 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 RORBQ92753 470 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms