RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 IGKV1D-39P04432 117 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 HSPD1P10809 573 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 GFAPP14136 432 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 NTF3P20783 257 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 PAX6P26367 422 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 IL3RAP26951 378 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 GDI2P50395 445 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 TAS2R43P59537 309 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 YWHAEP62258 255 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 RBX1P62877 108 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 RPL18AQ02543 176 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 DEGS2Q6QHC5 323 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 TMPRSS11AQ6ZMR5 421 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 OR2W3Q7Z3T1 314 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 VTCN1Q7Z7D3 282 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 ERO1BQ86YB8 467 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 FAM184AQ8NB25 1140 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 TMEM104Q8NE00 496 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 OR2Z1Q8NG97 314 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 OR51L1Q8NGJ5 315 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 TMEM234Q8WY98 164 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 GPR82Q96P67 336 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 EMC6Q9BV81 110 aa1.77□□□□□ -2.13
ECHDC1-201ENST00000368287 SEC16AO15027 2179 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 AK9Q5TCS8 1911 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 A0A1W2PPV4 95 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CEACAM18A8MTB9 384 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF701M0R085 212 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CHMP2AO43633 222 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 GMDSO60547 372 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CNMDO75829 334 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 GATBO75879 557 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 MBP02144 154 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CRYGCP07315 174 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 PRKACAP17612 351 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 MSR1P21757 451 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CPN2P22792 545 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CSKP41240 450 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 GALR1P47211 349 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 HCCSP53701 268 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 TAS2R39P59534 338 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC35A1P78382 337 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 FUT5Q11128 374 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 FAM53BQ14153 422 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 NDUFAF6Q330K2 333 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CYB561A3Q8NBI2 242 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CACNG8Q8WXS5 425 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 ALS2CR12Q96Q35 445 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 NAPGQ99747 312 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 C20orf144Q9BQM9 153 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 RHOXF2Q9BQY4 288 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SFXN3Q9BWM7 321 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SND1-IT1Q9HBX3 110 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SETD1AO15047 1707 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 SIGLEC1Q9BZZ2 1709 aa1.76□□□□□ -2.13
ECHDC1-201ENST00000368287 CACNA1DQ01668 2161 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 LOC102724200A0A096LPH7 203 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 IGHV6-1A0A0B4J1U7 121 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF233A6NK53 670 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF98A6NK75 572 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 KDELR3O43731 214 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 TRAPPC6AO75865 159 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ETHE1O95571 254 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 TTC4O95801 387 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 PTHP01270 115 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 IGKV1D-16P01601 117 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 NELFEP18615 380 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 GNRHRP30968 328 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ARL2P36404 184 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ATP5J2P56134 94 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 MFSD14CQ5VZR4 134 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 TBPL2Q6SJ96 375 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC25A29Q8N8R3 303 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 OR4M2Q8NGB6 313 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 OR5M1Q8NGP8 315 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 KLF14Q8TD94 323 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 Q96MT0 163 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 PORCNQ9H237 461 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ARMC7Q9H6L4 198 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 KIR3DX1Q9H7L2 352 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 CSNK1G1Q9HCP0 422 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 CHTOPQ9Y3Y2 248 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 ADGRL1O94910 1474 aa1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 RPRD2Q5VT52 1461 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-201ENST00000368287 SBNO1A3KN83 1393 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 A0A1W2PRF3 423 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 A0A1W2PRM7 423 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 CENPXA8MT69 81 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 J3QT63 122 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 K7EN84 100 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 PLEKHA8P1O95397 391 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 CD9P21926 228 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 IVDP26440 423 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 PSMB5P28074 263 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 PCK1P35558 622 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 MLF1P58340 268 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 IFFO1Q0D2I5 559 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 CPTPQ5TA50 214 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms