RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NUP37Q8NFH4 326 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 OR9Q1Q8NGQ5 310 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 FGFBP3Q8TAT2 258 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 NSMAFQ92636 917 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 PTP4A1Q93096 173 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 ZNF75AQ96N20 296 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 PITX2Q99697 317 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 TEX12Q9BXU0 123 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 RACGAP1Q9H0H5 632 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 RIBC2Q9H4K1 309 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 MED20Q9H944 212 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 NOX3Q9HBY0 568 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 NOX4Q9NPH5 578 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 RPRD1BQ9NQG5 326 aaKnown RBP6.61□□□□□ -1.35
YBX3-204ENST00000366290 CBLN4Q9NTU7 201 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 KLHL21Q9UJP4 597 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 B9D1Q9UPM9 204 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 FKBP7Q9Y680 259 aa6.61□□□□□ -1.35
YBX3-204ENST00000366290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.61□□□□□ -1.35
YBX3-204ENST00000366290 CR1P17927 2039 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ATP6V1G2-DDX39BF2Z307 99 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 M0QZ24 198 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 SLC16A7O60669 478 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 KHDRBS3O75525 346 aaKnown RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 MPZL1O95297 269 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 IGHV4-39P01824 125 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 CRYAAP02489 173 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 GYPBP06028 91 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 CECR9P0C854 216 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 PSKH1P11801 424 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 SELLP14151 372 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 B4GALT1P15291 398 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ZNF3P17036 446 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 SLC2A5P22732 501 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 PYCR1P32322 319 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 SLC25A1P53007 311 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 RAD23AP54725 363 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 TUBA1BP68363 451 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 NAAAQ02083 359 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 HNRNPA0Q13151 305 aaKnown RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 ENDOGQ14249 297 aaKnown RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 CTF1Q16619 201 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 AWAT2Q6E213 333 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 UGT2A3Q6UWM9 527 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 TUBA1AQ71U36 451 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 DPPA2Q7Z7J5 298 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 SKA3Q8IX90 412 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 CIARTQ8N365 385 aaPredicted RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 PACRGLQ8N7B6 248 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 BBS1Q8NFJ9 593 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 OR4F15Q8NGB8 312 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 FNDC8Q8TC99 324 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ORAI1Q96D31 301 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 GRAMD2BQ96HH9 432 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 FOXN4Q96NZ1 517 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 RBP7Q96R05 134 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 C1QTNF6Q9BXI9 259 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 HRH4Q9H3N8 390 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ZNF442Q9H7R0 627 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 C8orf4Q9NR00 106 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 POLE4Q9NR33 117 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 FAM118AQ9NWS6 357 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 MRPL22Q9NWU5 206 aaKnown RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 SMPD3Q9NY59 655 aaPredicted RBP6.6□□□□□ -1.35
YBX3-204ENST00000366290 NKIRAS2Q9NYR9 191 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 TVP23BQ9NYZ1 205 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ENOPH1Q9UHY7 261 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 FBXL3Q9UKT7 428 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 ATRQ13535 2644 aa6.6□□□□□ -1.35
YBX3-204ENST00000366290 IGHV2OR16-5A0A0B4J2B6 119 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 LOC100130705A0A1B0GUX0 176 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 CCDC182A6NF36 153 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 RIIAD1A6NNX1 92 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 A8MV72 311 aaPredicted RBP6.59□□□□□ -1.35
YBX3-204ENST00000366290 RENP00797 406 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 IFNGP01579 166 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 HMGN1P05114 100 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 IGKV2-30P06310 120 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
YBX3-204ENST00000366290 PATE4P0C8F1 98 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 NR2C1P13056 603 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 ZNF35P13682 527 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 ZNF14P17017 642 aaPredicted RBP6.59□□□□□ -1.35
YBX3-204ENST00000366290 SPI1P17947 270 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 CRABP1P29762 137 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 BDKRB2P30411 391 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 CALCRP30988 508 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 GGT2P36268 569 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 FABP6P51161 128 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 AQP4P55087 323 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 ADARB1P78563 741 aaKnown RBP6.59□□□□□ -1.35
YBX3-204ENST00000366290 SNAPC1Q16533 368 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 MEP1BQ16820 701 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 AADACL4Q5VUY2 407 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 PLBD1Q6P4A8 553 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 MDP1Q86V88 176 aa6.59□□□□□ -1.35
YBX3-204ENST00000366290 MYPOPQ86VE0 399 aaPredicted RBP6.59□□□□□ -1.35
YBX3-204ENST00000366290 LINC00346Q8IVM7 164 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms