RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RRADP55042 308 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 LTC4SQ16873 150 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ZNF684Q5T5D7 378 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 TMPPEQ6ZT21 453 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 DPPA2Q7Z7J5 298 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SLC25A42Q86VD7 318 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 OR14J1Q9UGF5 321 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ROS1P08922 2347 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 CYB5BO43169 146 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ONECUT2O95948 504 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 DCDP81605 110 aaKnown RBP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 MICBQ29980 383 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 PLPP3O14495 311 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 EFSO43281 561 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 CST4P01036 141 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SCAND1P57086 179 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 INSM1Q01101 510 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 LPAL2Q16609 132 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 RDH5Q92781 318 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ADAT3Q96EY9 351 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 ADAM10O14672 748 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 GPR37O15354 613 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 OR2A4O95047 310 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 GDF1P27539 372 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 RPS11P62280 158 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SKP2Q13309 424 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 YRDCQ86U90 279 aaKnown RBP12.38□□□□□ -0.43
COL6A1-201ENST00000361866 C17orf78Q8N4C9 275 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 OR56B2PQ8NGI1 322 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 PIK3IP1Q96FE7 263 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 OR2A7Q96R45 310 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 SLC39A9Q9NUM3 307 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 KCNK7Q9Y2U2 307 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 PSME4Q14997 1843 aa12.38□□□□□ -0.43
COL6A1-201ENST00000361866 CLDN1O95832 211 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 HPP00738 406 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 AWAT1Q58HT5 328 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 C9orf152Q5JTZ5 239 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 HLA-CQ95604 372 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 MALSU1Q96EH3 234 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 VN1R1Q9GZP7 353 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 PLEKHA2Q9HB19 425 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 RAB18Q9NP72 206 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 LPAR3Q9UBY5 353 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 HS3ST1O14792 307 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 SERPINA7P05543 415 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 BCKDHBP21953 392 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 FPR2P25090 351 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 RNF212Q495C1 297 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 GGNBP1Q5YKI7 109 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 FBXL14Q8N1E6 418 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 ST8SIA1Q92185 356 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 TUBG2Q9NRH3 451 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 ST3GAL6Q9Y274 331 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 ALG1L2C9J202 215 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 GPR137BO60478 399 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-201ENST00000361866 THNSL2Q86YJ6 484 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 AKR7LQ8NHP1 331 aa12.37□□□□□ -0.43
COL6A1-201ENST00000361866 NSG1A0A0A6YYJ2 146 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 ABHD16AO95870 558 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 FGF2P09038 288 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 RFC3P40938 356 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 DVL1P1P54792 670 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 OR10D4PQ8NGN7 298 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 RSPO3Q9BXY4 272 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 K7EQS6 105 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 PHOX2AO14813 284 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 FOXS1O43638 330 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 PTGFRP43088 359 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 ID4P47928 161 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 RPL19P84098 196 aaKnown RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 FZD2Q14332 565 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 PTCRAQ6ISU1 281 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 UNQ9370/PRO34162Q6UXP9 181 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 LDLRAD3Q86YD5 345 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms