RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OR4S1Q8NGB4 309 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 PELI1Q96FA3 418 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 TINAGL1Q9GZM7 467 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 TTC9Q92623 222 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ISOC2Q96AB3 205 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 GPR137Q96N19 417 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 FGF21Q9NSA1 209 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 DOCK8Q8NF50 2099 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 HTR1DP28221 377 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 PCBP3P57721 371 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 PLP1P60201 277 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 CCDC190Q86UF4 302 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 CBLN2Q8IUK8 224 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ACER3Q9NUN7 267 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 HS3ST2Q9Y278 367 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC17A4Q9Y2C5 497 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 OR2J2O76002 312 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 OR3A1P47881 315 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SEC11CQ9BY50 192 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TSPAN12O95859 305 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 YBX1P67809 324 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 RPS19BP1Q86WX3 136 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 MYOZ1Q9NP98 299 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SERPINE3A8MV23 424 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 RHBDL1O75783 438 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM87AP0C7U9 286 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 CTBSQ01459 385 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 LINC00696Q6ZRV3 163 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 C12orf49Q9H741 205 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 FBXL17Q9UF56 701 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 HDGFL3Q9Y3E1 203 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF737O75373 536 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 AWAT1Q58HT5 328 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 OR5AU1Q8NGC0 362 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 LHX3Q9UBR4 397 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 ZAR1LA6NP61 321 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 H3BP45 60 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SRP14P37108 136 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 CTF1Q16619 201 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TTC32Q5I0X7 151 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 GPX7Q96SL4 187 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 P4HTMQ9NXG6 502 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 DUXBA0A1W2PPF3 345 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SULT1A1P50225 295 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 HSD11B1LQ7Z5J1 315 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 KMT5CQ86Y97 462 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM191AQ9H0A3 160 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 GLIPR2Q9H4G4 154 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 TCRBV16S1A1N1A0A5B0 115 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 IDSB3KWA1 339 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SEMG1P04279 462 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 PARS2Q7L3T8 475 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 LRFN3Q9BTN0 628 aa11.94□□□□□ -0.5
SRGAP3-201ENST00000360413 CLDN10P78369 228 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM3AP98173 230 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM267Q0VDI3 215 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 KISS1RQ969F8 398 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 RNF2Q99496 336 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 KIR2DL1P43626 348 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 KIR2DL2P43627 348 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 STAC2Q6ZMT1 411 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 UBALD2Q8IYN6 164 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 OR1L3Q8NH93 324 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 Q96M85 177 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC2A10O95528 541 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LPAL2Q16609 132 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 MORN4Q8NDC4 146 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 VN1R17PQ8TDU5 208 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TOX2Q96NM4 488 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 CSNK1G1Q9HCP0 422 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 HIST1H1CP16403 213 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 C21orf58P58505 322 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 RELBQ01201 579 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms