RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ASB10Q8WXI3 467 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 FAAP24Q9BTP7 215 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 PBDC1Q9BVG4 233 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 LPAR5Q9H1C0 372 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 RCL1Q9Y2P8 373 aaKnown RBP5.82□□□□□ -1.48
CSDE1-203ENST00000358528 PCNX3Q9H6A9 2034 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 GPR37O15354 613 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 ZNHIT1O43257 154 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 DDAH2O95865 285 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 CD74P04233 296 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 GSTP1P09211 210 aaKnown RBP5.82□□□□□ -1.48
CSDE1-203ENST00000358528 MECP2P51608 486 aaKnown RBP5.82□□□□□ -1.48
CSDE1-203ENST00000358528 HNRNPKP61978 463 aaKnown RBP eCLIP5.82□□□□□ -1.48
CSDE1-203ENST00000358528 TLE1Q04724 770 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 PHF19Q5T6S3 580 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 GGNBP1Q5YKI7 109 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 RPUSD3Q6P087 351 aaKnown RBP5.82□□□□□ -1.48
CSDE1-203ENST00000358528 ARRDC1Q8N5I2 433 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 TMEM156Q8N614 296 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 OR1N1Q8NGS0 311 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 OR13G1Q8NGZ3 307 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF519Q8TB69 540 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF721Q8TF20 911 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 BORCS8Q96FH0 119 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 PRRX2Q99811 253 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 RNF126Q9BV68 326 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 FAM117AQ9C073 453 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 CRISPLD2Q9H0B8 497 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 RAB18Q9NP72 206 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 KPTNQ9Y664 436 aa5.82□□□□□ -1.48
CSDE1-203ENST00000358528 C7orf77A4D0Y5 90 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 OR5H15A6NDH6 313 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RAD51DO75771 328 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 JTBO76095 146 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DXOO77932 396 aaKnown RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 OR2C1O95371 312 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 IGHV4-34P06331 123 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 FPR2P25090 351 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 SHHQ15465 462 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 C4orf17Q53FE4 359 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 C9orf152Q5JTZ5 239 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 C1orf53Q5VUE5 145 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF813Q6ZN06 617 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PAQR4Q8N4S7 273 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 WDSUB1Q8N9V3 476 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 LILRB1Q8NHL6 650 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 EMG1Q92979 244 aaKnown RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 IP6K3Q96PC2 410 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 NMES1Q9C002 83 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 MIOXQ9UGB7 285 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 VCANP13611 3396 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DOCK8Q8NF50 2099 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 MS4A18H0YCH9 400 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF217O75362 1048 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 TRAPPC6AO75865 159 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 OR2J2O76002 312 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 IFNA17P01571 189 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 UBE2KP61086 200 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DMWDQ09019 674 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RHEBQ15382 184 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 USF2Q15853 346 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 MS4A18Q3C1V0 323 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PLAC9Q5JTB6 97 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DHRS11Q6UWP2 260 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 HOGA1Q86XE5 327 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 OR5T1Q8NG75 326 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 AKR7LQ8NHP1 331 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 SP7Q8TDD2 431 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PIGCQ92535 297 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 GHRLQ9UBU3 117 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 MMP17Q9ULZ9 603 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 SLC7A11Q9UPY5 501 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RP1L1Q8IWN7 2480 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 ONECUT2O95948 504 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 F10P00742 488 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 CST4P01036 141 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PATE4P0C8F1 98 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PNLIPP16233 465 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 TBPP20226 339 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 CHATP28329 748 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 MMP16P51512 607 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 P2RY4P51582 365 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DVL1P1P54792 670 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 FAM209BQ5JX69 171 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 C1orf100Q5SVJ3 147 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 SLC22A25Q6T423 547 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 C1QL2Q7Z5L3 287 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF695Q8IW36 515 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 PRR18Q8N4B5 295 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 SLC22A8Q8TCC7 542 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RNF133Q8WVZ7 376 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RTN4IP1Q8WWV3 396 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 NAA11Q9BSU3 229 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 RCC2Q9P258 522 aaKnown RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 GPR132Q9UNW8 380 aa5.81□□□□□ -1.48
CSDE1-203ENST00000358528 DIDO1Q9BTC0 2240 aaKnown RBP5.81□□□□□ -1.48
CSDE1-203ENST00000358528 A0A1W2PPC4 97 aa5.8□□□□□ -1.48
CSDE1-203ENST00000358528 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms