RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TNFSF12O43508 249 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 SCGNO76038 276 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 PPICP45877 212 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 SSPNQ14714 243 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 Q5PR19 223 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 HIST3H2BBQ8N257 126 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 OR51A2Q8NGJ7 313 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 SLC39A7Q92504 469 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 FAM3DQ96BQ1 224 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 DCBLD2Q96PD2 775 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 NDUFAF3Q9BU61 184 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 CENPMQ9NSP4 180 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 TIMM10BQ9Y5J6 103 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 URB1O60287 2271 aaKnown RBP8.32□□□□□ -1.08
SMG6-202ENST00000354901 TMEM212A6NML5 194 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 H0YIG0 161 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 AHSA1O95433 338 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 TRGC1P0CF51 173 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 GP1BBP13224 206 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 HLA-DOBP13765 273 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 IL11P20809 199 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 FGF7P21781 194 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 EFNA3P52797 238 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 ACTBP60709 375 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 ACTG1P63261 375 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 FMODQ06828 376 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 EIF5AL1Q6IS14 154 aaKnown RBP8.32□□□□□ -1.08
SMG6-202ENST00000354901 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 LYG2Q86SG7 212 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 HSD17B11Q8NBQ5 300 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 OTOSQ8NHW6 89 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 UTP23Q9BRU9 249 aaKnown RBP8.32□□□□□ -1.08
SMG6-202ENST00000354901 OR51B6Q9H340 312 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 CYTL1Q9NRR1 136 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 TAS2R4Q9NYW5 299 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 LSM5Q9Y4Y9 91 aaKnown RBP8.32□□□□□ -1.08
SMG6-202ENST00000354901 CHD3Q12873 2000 aaKnown RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 PHF3Q92576 2039 aaKnown RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 A0A0A6YYH2 397 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TRBV5-5A0A0J9YX44 114 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 A6NJ64 397 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 IFNL4K9M1U5 179 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 STK17BO94768 372 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 IGLV3-19P01714 112 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ITGB2P05107 769 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 PGA4P0DJD7 388 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 PGA3P0DJD8 388 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 PGA5P0DJD9 388 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ASCL1P50553 236 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 OR1D5P58170 312 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 SLC26A5P58743 744 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 RAB32Q13637 225 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 UBE2V2Q15819 145 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 RAB11BQ15907 218 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 GLYATL3Q5SZD4 288 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 COL13A1Q5TAT6 717 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 GPR137CQ8N3F9 429 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 CLEC1AQ8NC01 280 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 CPEB3Q8NE35 698 aaKnown RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ZNF700Q9H0M5 742 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 B4E171 279 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 LMX1BO60663 402 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 CD1AP06126 327 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 SLC10A1Q14973 349 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ELOCQ15369 112 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ISXQ2M1V0 245 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 DMRTC1Q5HYR2 192 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 HIST2H3PS2Q5TEC6 136 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 RTL6Q6ICC9 239 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 C9orf40Q8IXQ3 194 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 PRR18Q8N4B5 295 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 FAM213BQ8TBF2 198 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 MARCH1Q8TCQ1 289 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 Q8WTZ3 238 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 SLC46A1Q96NT5 459 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 DHDHQ9UQ10 334 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 EMC9Q9Y3B6 208 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TMEM14AQ9Y6G1 99 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 LRP4O75096 1905 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TEX13DA0A0J9YY54 714 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 CA11O75493 328 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TFPI2P48307 235 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 ARRB1P49407 418 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 NPY4RP50391 375 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 INSM1Q01101 510 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 SLC17A1Q14916 467 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 HAGHQ16775 308 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 TSTD1Q8NFU3 115 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 OR13C8Q8NGS7 320 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 SLC25A44Q96H78 314 aaPredicted RBP8.31□□□□□ -1.08
SMG6-202ENST00000354901 RARRES2Q99969 163 aa8.31□□□□□ -1.08
SMG6-202ENST00000354901 PHF7Q9BWX1 381 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms