RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PPP1CCP36873 323 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 GABRA4P48169 554 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PCK2Q16822 640 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 AADACL3Q5VUY0 350 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF761Q86XN6 746 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 C9orf40Q8IXQ3 194 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 C12orf76Q8N812 135 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM104Q8NE00 496 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 OR5H2Q8NGV7 314 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 OR13G1Q8NGZ3 307 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 CCL4L1Q8NHW4 92 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 TSACCQ96A04 125 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 KTI12Q96EK9 354 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 BMFQ96LC9 184 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 DDA1Q9BW61 102 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 MRPL22Q9NWU5 206 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PITPNC1Q9UKF7 332 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 BRCA2P51587 3418 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 SPTBP11277 2137 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 TRAV36DV7A0A075B6V5 113 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 E5RGE8 158 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 TGFBR3LH3BV60 316 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 PHOX2AO14813 284 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 GPR137BO60478 399 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 HLA-DQA2P01906 255 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 BGLAPP02818 100 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 GZMBP10144 247 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 APOBEC1P41238 236 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 FHITP49789 147 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 DLK1P80370 383 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SGCBQ16585 318 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 GPR157Q5UAW9 335 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 C1QL3Q5VWW1 255 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 ARMC6Q6NXE6 501 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 RD3Q7Z3Z2 195 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM156Q8N614 296 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 OR2I1PQ8NGU4 316 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 OR52N5Q8NH56 324 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 FNDC9Q8TBE3 224 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 CA5BP1Q8WTZ4 195 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 FRZBQ92765 325 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 ABHD6Q9BV23 337 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 TCEAL2Q9H3H9 227 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 CERS4Q9HA82 394 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 CRLF2Q9HC73 371 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 G6PC2Q9NQR9 355 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 B3GALT5Q9Y2C3 310 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 NSG2Q9Y328 171 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 TRBV23OR9-2A0A075B6M9 112 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 PRSS37A4D1T9 235 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 B4DEV8 164 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 EREGO14944 169 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 OR6A2O95222 327 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SRP19P09132 144 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 HIST1H1DP16402 221 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 GLRA1P23415 457 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 RBMXP38159 391 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 EMP2P54851 167 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 RPL27P61353 136 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC10A1Q14973 349 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 DEGS2Q6QHC5 323 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC35E3Q7Z769 313 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 HSD17B11Q8NBQ5 300 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF519Q8TB69 540 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC46A1Q96NT5 459 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 RARRES2Q99969 163 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 OR52A1Q9UKL2 312 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 CLDN16Q9Y5I7 305 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 HS3ST3A1Q9Y663 406 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 MYO7AQ13402 2215 aa9.12□□□□□ -0.95
CHRNA1-202ENST00000348749 KIF26BQ2KJY2 2108 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 ARHGEF17Q96PE2 2063 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 IGLV1-36A0A0B4J1U3 117 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 A0A1W2PQD3 144 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 A8MVM7 634 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 HRKO00198 91 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 LMX1BO60663 402 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 C1QL1O75973 258 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TNFP01375 233 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 IFNA21P01568 189 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 MBP02144 154 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 SERPINA2P20848 420 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 AKT2P31751 481 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 PTGER4P35408 488 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TAS2R46P59540 309 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM196Q5HYL7 178 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 RTN4RL2Q86UN3 420 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM183AQ8IXX5 376 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 APCDD1LQ8NCL9 501 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 SEMA6DQ8NFY4 1073 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 OR52N4Q8NGI2 321 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 OR14K1Q8NGZ2 314 aa9.11□□□□□ -0.95
CHRNA1-202ENST00000348749 TAAR8Q969N4 342 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms