RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 C11orf98E9PRG8 122 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 CA11O75493 328 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 H2BFMP0C1H6 154 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 DANCRP0C864 163 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SP9P0CG40 484 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF708P17019 499 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 S100A2P29034 98 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 FCGR2CP31995 323 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 RBMXP38159 391 aaKnown RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 DCAF7P61962 342 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 DEFA6Q01524 100 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 PPA1Q15181 289 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 HYAL4Q2M3T9 481 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SLC22A6Q4U2R8 563 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 AKIRIN2Q53H80 203 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 KLHL24Q6TFL4 600 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 TMEM151BQ8IW70 566 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ST7LQ8TDW4 575 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 PFDN5Q99471 154 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 URM1Q9BTM9 101 aaKnown RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SLC35B3Q9H1N7 401 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 BCO1Q9HAY6 547 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 UFSP2Q9NUQ7 469 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 RP1P56715 2156 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ASXL3Q9C0F0 2248 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 C17orf105B2RV13 164 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 P2RY10O00398 339 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 DEDDO75618 318 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 F10P00742 488 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 IFNA2P01563 188 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 IFNA21P01568 189 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 CLPSP04118 112 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 CHATP28329 748 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 GNALP38405 381 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 OR3A2P47893 321 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 NPY4RP50391 375 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF84P51523 738 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 P2RY4P51582 365 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SLC26A5P58743 744 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 NNATQ16517 81 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 CBLN3Q6UW01 205 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 METTL27Q8N6F8 245 aaPredicted RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF565Q8N9K5 539 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF248Q8NDW4 579 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SLC26A10Q8NG04 563 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 OR51F2Q8NH61 342 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 RNF133Q8WVZ7 376 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ROBO4Q8WZ75 1007 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 DAZLQ92904 295 aaKnown RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 SGK3Q96BR1 496 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 NKX3-1Q99801 234 aaPredicted RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 PRRX2Q99811 253 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 ATXN7L1Q9ULK2 861 aaPredicted RBP14.01□□□□□ -0.17
HMGA1-202ENST00000347617 FRG2CA6NGY1 282 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 UMAD1C9J7I0 102 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 NTN3O00634 580 aaPredicted RBP14□□□□□ -0.17
HMGA1-202ENST00000347617 AGPAT2O15120 278 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 SYT7O43581 403 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 IFNA10P01566 189 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 IGKV3-11P04433 115 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 CYC1P08574 325 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 RPS2P15880 293 aaKnown RBP14□□□□□ -0.17
HMGA1-202ENST00000347617 AMY2BP19961 511 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 THBS4P35443 961 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 POLR2HP52434 150 aaKnown RBP14□□□□□ -0.17
HMGA1-202ENST00000347617 SLC37A1P57057 533 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 CLINT1Q14677 625 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 GPR157Q5UAW9 335 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 C1orf140Q5VVS0 124 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 LRRC18Q8N456 261 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 OR52N4Q8NGI2 321 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 FNDC9Q8TBE3 224 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 IFI44Q8TCB0 444 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 GINS3Q9BRX5 216 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 SCRT1Q9BWW7 348 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 PARPBPQ9NWS1 579 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 RARRES3Q9UL19 164 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 ADAMTS20P59510 1910 aa14□□□□□ -0.17
HMGA1-202ENST00000347617 A8MVM7 634 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 E5RGE8 158 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF93P35789 620 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZP4Q12836 540 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF239Q16600 458 aaKnown RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 MIDNQ504T8 468 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 DCXRQ7Z4W1 244 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF101Q8IZC7 436 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 OR8G5Q8NG78 346 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 C5orf34Q96MH7 638 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 FSCN3Q9NQT6 498 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 FAM206AQ9NX38 181 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 MRPS28Q9Y2Q9 187 aaKnown RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 COA3Q9Y2R0 106 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 NSG2Q9Y328 171 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ELOA3CA0A087WX78 387 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 PLPP3O14495 311 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms