RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ADPRHP54922 357 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 DMRTC1Q5HYR2 192 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 DRAM2Q6UX65 266 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 POM121Q96HA1 1249 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 ZNF275Q9NSD4 429 aaPredicted RBP15.66■□□□□ 0.1
SPAST-202ENST00000345662 POLDIP2Q9Y2S7 368 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 H0YIG0 161 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 GVQW1Q8N7I0 195 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 FBLIM1Q8WUP2 373 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 TRMT61AQ96FX7 289 aaKnown RBP15.66■□□□□ 0.1
SPAST-202ENST00000345662 ADGRG7Q96K78 797 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 MRPS18AQ9NVS2 196 aaKnown RBP15.66■□□□□ 0.1
SPAST-202ENST00000345662 CD207Q9UJ71 328 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 PPIL1Q9Y3C6 166 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 AQP7P3A6NL99 342 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 M0QZK8 103 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 GGCTO75223 188 aaKnown RBP15.66■□□□□ 0.1
SPAST-202ENST00000345662 PTTG1IPP53801 180 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 ERVFC1-1P60608 527 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 RAB33BQ9H082 229 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 PCDHGA9Q9Y5G4 932 aaKnown RBP15.66■□□□□ 0.1
SPAST-202ENST00000345662 MAP1LC3B2A6NCE7 125 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 PTGFRP43088 359 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 AMER3Q8N944 861 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 OR4D11Q8NGI4 311 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 MAP1LC3BQ9GZQ8 125 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 DNAJB12Q9NXW2 375 aaKnown RBP15.65■□□□□ 0.1
SPAST-202ENST00000345662 MYO9BQ13459 2157 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 FAM24AA6NFZ4 105 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 CDKN2AP42771 156 aaKnown RBP15.65■□□□□ 0.1
SPAST-202ENST00000345662 FZD2Q14332 565 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 DEGS2Q6QHC5 323 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 SLC25A42Q86VD7 318 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 EID2BQ96D98 161 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 NAA60Q9H7X0 242 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 AMDHD2Q9Y303 409 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 HYAL3O43820 417 aaPredicted RBP15.65■□□□□ 0.1
SPAST-202ENST00000345662 CDC20BQ86Y33 519 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
SPAST-202ENST00000345662 LBHQ53QV2 105 aaPredicted RBP15.65■□□□□ 0.1
SPAST-202ENST00000345662 TRIM61Q5EBN2 209 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 OR11L1Q8NGX0 322 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 PATE1Q8WXA2 126 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 FAM122AQ96E09 287 aa15.65■□□□□ 0.1
SPAST-202ENST00000345662 SH2D1BO14796 132 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 GPR37O15354 613 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 SPRY1O43609 319 aaPredicted RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 ZNF573Q86YE8 665 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 LILRB1Q8NHL6 650 aaPredicted RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 MRGPRX4Q96LA9 322 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 RAB40CQ96S21 281 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 ZNF107Q9UII5 783 aaPredicted RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 LSM2Q9Y333 95 aaKnown RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 MFSD2BA6NFX1 497 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 TNFSF18Q9UNG2 199 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 YTHDF2Q9Y5A9 579 aaKnown RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 A0A1W2PPE2 198 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 H0Y8X5 98 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 FUT3P21217 361 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 C21orf62-AS1Q17RA5 79 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 TBC1D28Q2M2D7 210 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 ZNF468Q5VIY5 522 aaPredicted RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 CLEC18BQ6UXF7 455 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 FAM173AQ9BQD7 235 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 LINC01553A4QN01 128 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 CDRT15L2A8MXV6 281 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 B4DEV8 164 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 NPIPB8E9PQR5 432 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 ENSAO43768 121 aaKnown RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 KISS1Q15726 138 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 IL22RA2Q969J5 263 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 Q9N2K0 584 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 PARP11Q9NR21 331 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 FBXO34Q9NWN3 711 aa15.64■□□□□ 0.09
SPAST-202ENST00000345662 MRM2Q9UI43 246 aaKnown RBP15.64■□□□□ 0.09
SPAST-202ENST00000345662 ARAP2Q8WZ64 1704 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SIRPB1O00241 398 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 ZNF25P17030 456 aaPredicted RBP15.63■□□□□ 0.09
SPAST-202ENST00000345662 FUT6P51993 359 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SUB1P53999 127 aaKnown RBP eCLIP15.63■□□□□ 0.09
SPAST-202ENST00000345662 SLC26A10Q8NG04 563 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SPSB1Q96BD6 273 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SNX22Q96L94 193 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 CNTD2Q9H8S5 307 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SIRT7Q9NRC8 400 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 LIPGQ9Y5X9 500 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 ADAM20O43506 726 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 IGHV3-9P01782 118 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 IGHEP01854 428 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 FCER1GP30273 86 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 VN1R1Q9GZP7 353 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 ZFC3H1O60293 1989 aaKnown RBP15.63■□□□□ 0.09
SPAST-202ENST00000345662 ZNF737O75373 536 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 USF1P22415 310 aaPredicted RBP15.63■□□□□ 0.09
SPAST-202ENST00000345662 GPR12P47775 334 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 SHHQ15465 462 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 DGAT2L6Q6ZPD8 337 aa15.63■□□□□ 0.09
SPAST-202ENST00000345662 HAAOP46952 286 aa15.62■□□□□ 0.09
SPAST-202ENST00000345662 LIMK1P53667 647 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms