RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 LPAR3Q9UBY5 353 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 MTCL1Q9Y4B5 1905 aaKnown RBP13.8□□□□□ -0.2
PTPRU-201ENST00000345512 DHHO43323 396 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 RD3LP0DJH9 198 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 TLE4Q04727 773 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 SHISA5Q8N114 240 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 OR10G3Q8NGC4 313 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 RNF133Q8WVZ7 376 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 MAGT1Q9H0U3 335 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 A0A1W2PQD3 144 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ZNF724A8MTY0 619 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ABCD4O14678 606 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ZBTB25P24278 435 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 FOLR3P41439 243 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ASCL1P50553 236 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 CARD18P57730 90 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 FOXL2P58012 376 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ROM1Q03395 351 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 JMJD6Q6NYC1 403 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-201ENST00000345512 FIP1L1Q6UN15 594 aaKnown RBP13.8□□□□□ -0.2
PTPRU-201ENST00000345512 CLEC9AQ6UXN8 241 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ZNF813Q6ZN06 617 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 DPPA2Q7Z7J5 298 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 C20orf196Q8IYI0 205 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 SLC22A18ASQ8N1D0 253 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ZFP62Q8NB50 900 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-201ENST00000345512 PP6455Q8WZ26 134 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 B4GALT7Q9UBV7 327 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 AK3Q9UIJ7 227 aa13.8□□□□□ -0.2
PTPRU-201ENST00000345512 ZNF98A6NK75 572 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 VAMP5O95183 116 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 NQO2P16083 231 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 BCKDHBP21953 392 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 DVL1P1P54792 670 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-201ENST00000345512 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 A6NLC8 198 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 METTL12A8MUP2 240 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 HBE1P02100 147 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 IL11P20809 199 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 MPGP29372 298 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 GFI1Q99684 422 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 A8MXK9 166 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
PTPRU-201ENST00000345512 DXOO77932 396 aaKnown RBP13.79□□□□□ -0.2
PTPRU-201ENST00000345512 GLB1P16278 677 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 TMEM33P57088 247 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 PDCD1Q15116 288 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 ATRAIDQ6UW56 229 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 SAT2Q96F10 170 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-201ENST00000345512 ADAM19Q9H013 955 aa13.79□□□□□ -0.2
PTPRU-201ENST00000345512 RAB27BO00194 218 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 F10P00742 488 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 NRASP01111 189 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 TTRP02766 147 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 CRYBA1P05813 215 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 GALNSP34059 522 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 DEFA6Q01524 100 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 HIST2H3PS2Q5TEC6 136 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 GGNBP1Q5YKI7 109 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 VOPP1Q96AW1 172 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 IGLV1-36A0A0B4J1U3 117 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 SMCO3A2RU48 225 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 HPNP05981 417 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 FSTP19883 344 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 THBS4P35443 961 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 CXCL12P48061 93 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 ZNF260Q3ZCT1 412 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 SKA3Q8IX90 412 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 PIGQQ9BRB3 760 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 FAAP24Q9BTP7 215 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 ST3GAL6Q9Y274 331 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 HDGFL3Q9Y3E1 203 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 IGHV1OR21-1A0A087WYE8 117 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 ZFP92A6NM28 416 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 HSD17B6O14756 317 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 EFSO43281 561 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 FKBP2P26885 142 aaKnown RBP13.78□□□□□ -0.2
PTPRU-201ENST00000345512 KCNJ3P48549 501 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 MEOX2P50222 304 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 DUSP3P51452 185 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-201ENST00000345512 PDZD11Q5EBL8 140 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 PTX4Q96A99 478 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 RBMXL1Q96E39 390 aaKnown RBP13.78□□□□□ -0.2
PTPRU-201ENST00000345512 SEC11CQ9BY50 192 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 STRAPQ9Y3F4 350 aaKnown RBP13.78□□□□□ -0.2
PTPRU-201ENST00000345512 NPIPB9F8W1W9 429 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 SSSCA1O60232 199 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 IFI6P09912 130 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 YRDCQ86U90 279 aaKnown RBP13.78□□□□□ -0.2
PTPRU-201ENST00000345512 ZNF721Q8TF20 911 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 REEP6Q96HR9 211 aa13.78□□□□□ -0.2
PTPRU-201ENST00000345512 A0A1W2PP11 408 aa13.77□□□□□ -0.2
PTPRU-201ENST00000345512 ANKRD30BLA7E2S9 258 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms