RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 LYPD6Q86Y78 171 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 TCTN2Q96GX1 697 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 THAP10Q9P2Z0 257 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 C17orf105B2RV13 164 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 DEDDO75618 318 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 RPS2P15880 293 aaKnown RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 RSPO4Q2I0M5 234 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 CPEB2Q7Z5Q1 589 aaKnown RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 PEG10Q86TG7 708 aaKnown RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 C19orf47Q8N9M1 422 aaKnown RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 MUCL1Q96DR8 90 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 MMABQ96EY8 250 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 B3GALT1Q9Y5Z6 326 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 HSPB2A8KAH6 182 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 TNFSF14O43557 240 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 CDC14BO60729 498 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 FAM3AP98173 230 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 HSPB2Q16082 182 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 ABHD12BQ7Z5M8 362 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF440Q8IYI8 595 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 OR5D14Q8NGL3 314 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 PTX4Q96A99 478 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 ELSPBP1Q96BH3 223 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 MALSU1Q96EH3 234 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF2Q9BSG1 426 aaPredicted RBP13.14□□□□□ -0.31
CLCN1-201ENST00000343257 PBOV1Q9GZY1 135 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 SRSF10O75494 262 aaKnown RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 IFNA21P01568 189 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 HSD11B1P28845 292 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 NOVA1P51513 510 aaKnown RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TFF2Q03403 129 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 RNASE11Q8TAA1 199 aaKnown RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 RSC1A1Q92681 617 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 C1orf123Q9NWV4 160 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 BORCS7-ASMTA0A0B4J1R7 106 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 A8MVM7 634 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 FKTNO75072 461 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TAS2R60P59551 318 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 FXYD4P59646 89 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 S100A13Q99584 98 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
CLCN1-201ENST00000343257 POLR1DQ9Y2S0 133 aa13.13□□□□□ -0.31
CLCN1-201ENST00000343257 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
CLCN1-201ENST00000343257 BLVRBP30043 206 aaPredicted RBP13.12□□□□□ -0.31
CLCN1-201ENST00000343257 DLK1P80370 383 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
CLCN1-201ENST00000343257 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 OSGIN2Q9Y236 505 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 FOXK1P85037 733 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 ELOBQ15370 118 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 VAX1Q5SQQ9 334 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 SULF2Q8IWU5 870 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
CLCN1-201ENST00000343257 ARGFXA6NJG6 315 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 TCAPO15273 167 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 TBPP20226 339 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 APOBEC1P41238 236 aaKnown RBP13.12□□□□□ -0.31
CLCN1-201ENST00000343257 CHAF1BQ13112 559 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 C1orf61Q13536 156 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 UBE2V2Q15819 145 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 AKR1C8PQ5T2L2 129 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 HIST3H2BBQ8N257 126 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 LYPD6BQ8NI32 183 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 SLAMF6Q96DU3 332 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 SNX22Q96L94 193 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 SCGB3A2Q96PL1 93 aa13.12□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
CLCN1-201ENST00000343257 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 CLDN4O14493 209 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 GEMIN2O14893 280 aaKnown RBP13.11□□□□□ -0.31
CLCN1-201ENST00000343257 SOX15O60248 233 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 NXPH3O95157 252 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 GP1BBP13224 206 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 FNDC7Q5VTL7 733 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 OR10AD1Q8NGE0 317 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 FRZBQ92765 325 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms