RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CLEC12BQ2HXU8 276 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 LYSMD4Q5XG99 296 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 RPL7L1Q6DKI1 246 aaKnown RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 ACOT7LQ6ZUV0 252 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 WDFY1Q8IWB7 410 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 C19orf25Q9UFG5 118 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 KCNMB2Q9Y691 235 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 K7EPK0 472 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 M0R135 149 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 HOXD4P09016 255 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 CPN1P15169 458 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CNR1P21554 472 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 CASRP41180 1078 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 MEOX2P50222 304 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 FABP9Q0Z7S8 132 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 RHEBQ15382 184 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 KISS1Q15726 138 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 WIPI1Q5MNZ9 446 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 ZNF774Q6NX45 483 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 FAM71E2Q8N5Q1 922 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 DMRTA2Q96SC8 542 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
USP1-201ENST00000339950 RCL1Q9Y2P8 373 aaKnown RBP10.57□□□□□ -0.72
USP1-201ENST00000339950 COL6A3P12111 3177 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 WNK2Q9Y3S1 2297 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 PHF1O43189 567 aaPredicted RBP10.56□□□□□ -0.72
USP1-201ENST00000339950 SPP1P10451 314 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 GGTLC2Q14390 218 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 OR5AS1Q8N127 324 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 OR13C8Q8NGS7 320 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 FAM213BQ8TBF2 198 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 PIGMQ9H3S5 423 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 MYOTQ9UBF9 498 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 TRBV5-5A0A0J9YX44 114 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 EFSO43281 561 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 P04436 131 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 NOVA1P51513 510 aaKnown RBP10.56□□□□□ -0.72
USP1-201ENST00000339950 VAMP2P63027 116 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 SLC16A14Q7RTX9 510 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 ANKRD37Q7Z713 158 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 C17orf78Q8N4C9 275 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 RNF141Q8WVD5 230 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 CRLF2Q9HC73 371 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 ZNF319Q9P2F9 582 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 MSGN1A6NI15 193 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 RAB27BO00194 218 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 TCN2P20062 427 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 PPA1Q15181 289 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 IGFBP7Q16270 282 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 C3AR1Q16581 482 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 LINC00114Q6XXX2 140 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 OR5M9Q8NGP3 310 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 RDH5Q92781 318 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 SRPK3Q9UPE1 567 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 CLDN16Q9Y5I7 305 aa10.56□□□□□ -0.72
USP1-201ENST00000339950 HS3ST1O14792 307 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 CCL3P10147 92 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 OR2B11Q5JQS5 317 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 AAED1Q7RTV5 226 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 RPS19BP1Q86WX3 136 aaKnown RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 OR51H1Q8NH63 302 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 UBE2ZQ9H832 354 aaPredicted RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 PRDM6Q9NQX0 595 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 PLXNA2O75051 1894 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 SOX15O60248 233 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 GALNSP34059 522 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 KIAA0141Q14154 515 aaPredicted RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 SSX2Q16385 188 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 NCMAPQ5T1S8 102 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 OR56B1Q8NGI3 324 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 ASB10Q8WXI3 467 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 AMDHD2Q9Y303 409 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 MMP24Q9Y5R2 645 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 DOCK11Q5JSL3 2073 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 MFSD2BA6NFX1 497 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 OR6C76A6NM76 312 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 SRFP11831 508 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 APOBEC1P41238 236 aaKnown RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 GLP1RP43220 463 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 NKX6-1P78426 367 aaPredicted RBP10.55□□□□□ -0.72
USP1-201ENST00000339950 UNC119Q13432 240 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 TCEAL6Q6IPX3 200 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 DRAM2Q6UX65 266 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms