RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CRIP3Q6Q6R5 217 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 IGF2-ASQ6U949 168 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 VASH2Q86V25 355 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 HOGA1Q86XE5 327 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 KCNRGQ8N5I3 272 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 PNLDC1Q8NA58 520 aaKnown RBP14.28□□□□□ -0.12
LITAF-201ENST00000339430 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 SRXN1Q9BYN0 137 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 OR10A2Q9H208 303 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
LITAF-201ENST00000339430 PLEK2Q9NYT0 353 aa14.28□□□□□ -0.12
LITAF-201ENST00000339430 SDCBPO00560 298 aaPredicted RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 DHHO43323 396 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 UBBP0CG47 229 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 PRSS12P56730 875 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 RPS27AP62979 156 aaKnown RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 UBA52P62987 128 aaKnown RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 C10orf128Q5T292 105 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 TMEM123Q8N131 208 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 TERB2Q8NHR7 220 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 PAQR8Q8TEZ7 354 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 SSC4DQ8WTU2 575 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 THOC3Q96J01 351 aaKnown RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 URM1Q9BTM9 101 aaKnown RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 ZNF471Q9BX82 626 aaPredicted RBP14.27□□□□□ -0.12
LITAF-201ENST00000339430 ULBP2Q9BZM5 246 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 GPR160Q9UJ42 338 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 PIGLQ9Y2B2 252 aa14.27□□□□□ -0.12
LITAF-201ENST00000339430 A0A0G2JMM0 328 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 A0A1W2PPB8 328 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 A0A1W2PRS3 328 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 KIR3DP1A8MWS1 328 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 MFNGO00587 321 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 EIF1BO60739 113 aaKnown RBP14.27□□□□□ -0.13
LITAF-201ENST00000339430 HTR3BO95264 441 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 DUS4LO95620 317 aaKnown RBP14.27□□□□□ -0.13
LITAF-201ENST00000339430 SLC25A4P12235 298 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 FCGR2AP12318 317 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 TBPP20226 339 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 PTGFRP43088 359 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 RIPPLY1Q0D2K3 151 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 ECH1Q13011 328 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 CHAF1BQ13112 559 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 SLC9A3R2Q15599 337 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 ATP1A1-AS1Q5TC04 95 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 YRDCQ86U90 279 aaKnown RBP14.27□□□□□ -0.13
LITAF-201ENST00000339430 FBXO17Q96EF6 278 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 NAA11Q9BSU3 229 aaPredicted RBP14.27□□□□□ -0.13
LITAF-201ENST00000339430 MED9Q9NWA0 146 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 MBD2Q9UBB5 411 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 DCHS1Q96JQ0 3298 aa14.27□□□□□ -0.13
LITAF-201ENST00000339430 DHRS3O75911 302 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 AMY2BP19961 511 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 SERPINF1P36955 418 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 DCAF10Q5QP82 559 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 OR5H2Q8NGV7 314 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 THAP6Q8TBB0 222 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 MS4A7Q9GZW8 240 aaPredicted RBP14.26□□□□□ -0.13
LITAF-201ENST00000339430 C5orf66Q9H5L9 145 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 M0R135 149 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 BCL2L11O43521 198 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 OR2F2O95006 317 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 IGLV3-1P01715 115 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 NR2C1P13056 603 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 HLA-GP17693 338 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 CTSSP25774 331 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 BLVRBP30043 206 aaPredicted RBP14.26□□□□□ -0.13
LITAF-201ENST00000339430 SRSF6Q13247 344 aaKnown RBP14.26□□□□□ -0.13
LITAF-201ENST00000339430 OR2F1Q13607 317 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 FAHD2BQ6P2I3 314 aaPredicted RBP14.26□□□□□ -0.13
LITAF-201ENST00000339430 STPG2Q8N412 459 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 ROBO4Q8WZ75 1007 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 PSMF1Q92530 271 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 ZNF799Q96GE5 643 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 FAHD2AQ96GK7 314 aa14.26□□□□□ -0.13
LITAF-201ENST00000339430 AKAP13Q12802 2813 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 LOC105371267A0A1B0GV96 52 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 NAT1P18440 290 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 STARP49675 285 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 CSNK2A1P68400 391 aaPredicted RBP14.25□□□□□ -0.13
LITAF-201ENST00000339430 H3F3CQ6NXT2 135 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 ACOT7LQ6ZUV0 252 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 FAM219AQ8IW50 185 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 BVESQ8NE79 360 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 PXT1Q8NFP0 134 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 OR2AE1Q8NHA4 323 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 TMEM230Q96A57 120 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 SH2D2AQ9NP31 389 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 V9GYS6 101 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 DOCK10Q96BY6 2186 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 A8MXK9 166 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 VAMP5O95183 116 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 FGF2P09038 288 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 PRF1P14222 555 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 THBS4P35443 961 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 ZNF345Q14585 488 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 RTP5Q14D33 572 aa14.25□□□□□ -0.13
LITAF-201ENST00000339430 ACER2Q5QJU3 275 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms