RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 IZUMO1Q8IYV9 350 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TNFAIP8L1Q8WVP5 186 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RADILQ96JH8 1075 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TUBG2Q9NRH3 451 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ABCB10Q9NRK6 738 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ING4Q9UNL4 249 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 SPEF1Q9Y4P9 236 aa12.64□□□□□ -0.39
CDK5RAP3-201ENST00000338399 VSIG8P0DPA2 414 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CA6P23280 308 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PITPNBP48739 271 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MMP15P51511 669 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CAPZA1P52907 286 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ATP1B3P54709 279 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CEACAM21Q3KPI0 293 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ZNF718Q3SXZ3 478 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RGS7BPQ6MZT1 257 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MTFR2Q6P444 385 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 C1QL2Q7Z5L3 287 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 HPSE2Q8WWQ2 592 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 C1orf147Q96MC9 270 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GAL3ST1Q99999 423 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 FGF23Q9GZV9 251 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MPC1Q9Y5U8 109 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 HIVEP3Q5T1R4 2406 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 DPRXA6NFQ7 191 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 UPK1BO75841 260 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PLATP00750 562 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 SELEP16581 610 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CDK2P24941 298 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PTAFRP25105 342 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PTBP1P26599 531 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GCH1P30793 250 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ZP1P60852 638 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 QRFPP83859 136 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 UNC119Q13432 240 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 OR8H2Q8N162 312 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CPNE2Q96FN4 548 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 HIST1H2AAQ96QV6 131 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PALMDQ9NP74 551 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 C14orf119Q9NWQ9 140 aa12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-201ENST00000338399 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CTAG2O75638 210 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TMEM225BP0DP42 221 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 NAT2P11245 290 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GPM6AP51674 278 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 BAK1Q16611 211 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MBNL2Q5VZF2 373 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 VHLLQ6RSH7 139 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RNF170Q96K19 258 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 S100A13Q99584 98 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CCDC32Q9BV29 185 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RAB22AQ9UL26 194 aa12.62□□□□□ -0.39
CDK5RAP3-201ENST00000338399 A0A1W2PP11 408 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PQLC2LA1A4F0 135 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TMEM14DPA8MWL7 114 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ZNF732B4DXR9 585 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 B8ZZF3 427 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ABCD4O14678 606 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ANGPTL7O43827 346 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TIMM8AO60220 97 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 UBBP0CG47 229 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RAB6AP20340 208 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 GLRXP35754 106 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 RANBP1P43487 201 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 MSMPQ1L6U9 139 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 SLC22A6Q4U2R8 563 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 TMEM69Q5SWH9 247 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 OR5A2Q8NGI9 324 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 PTX4Q96A99 478 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 HCFC1P51610 2035 aa12.61□□□□□ -0.39
CDK5RAP3-201ENST00000338399 ZG16O60844 167 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms