RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C21orf140B9A014 251 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 VSIG8P0DPA2 414 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 AVPR2P30518 371 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PNLIPRP3Q17RR3 467 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 C6orf201Q7Z4U5 140 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 LILRB2Q8N423 598 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ROM1Q03395 351 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 DEFB109BQ30KR1 87 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM128Q5BJH2 165 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 FAM122BQ7Z309 247 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 OR2W3Q7Z3T1 314 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 LSRQ86X29 649 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 EMG1Q92979 244 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 SLC25A31Q9H0C2 315 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.58□□□□□ -1.521e-6■■■■■ 31.8
PRKDC-202ENST00000338368 B3GAT1Q9P2W7 334 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 DNPH1O43598 174 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HPP00738 406 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ADRA2AP08913 450 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 GABRA4P48169 554 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 PLA2G7Q13093 441 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HAGHLQ6PII5 290 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 POLDIP2Q9Y2S7 368 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 SPTAN1Q13813 2472 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RLFQ13129 1914 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 FUT6P51993 359 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 LINC00114Q6XXX2 140 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RDH5Q92781 318 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 APOBEC3DQ96AK3 386 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ARHGAP5-AS1Q96IT6 56 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HINT2Q9BX68 163 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 A0A1B0GV50 99 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 SLC22A20A6NK97 555 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 SERPINE3A8MV23 424 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF732B4DXR9 585 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HLA-HP01893 362 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 UNQ9370/PRO34162Q6UXP9 181 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 CNTNAP3BQ96NU0 1288 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF391Q9UJN7 358 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ARPC4-TTLL3A0A0A6YYG9 625 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 F8W036 122 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 CXCL3P19876 107 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 PHLDA2Q53GA4 152 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 VHLLQ6RSH7 139 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 IGHV1-45A0A0A0MS14 117 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HS3ST1O14792 307 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 HPXP02790 462 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 EFNB1P98172 346 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 CATR1Q13166 79 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TRBV5-5A0A0J9YX44 114 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 MRPS34P82930 218 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 GCNT2Q8N0V5 402 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RNF141Q8WVD5 230 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TRGV5A0A0B4J1U4 118 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 M0R036 132 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 CELA2AP08217 269 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 BMI1P35226 326 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 MAGEA5P43359 124 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 PLPPR5Q32ZL2 321 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF766Q5HY98 468 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RBPMSQ93062 196 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 B4E171 279 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 IFNA2P01563 188 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RAB6AP20340 208 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 CD96P40200 585 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TSPAN7P41732 249 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 GABRA2P47869 451 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 OR3A4PP47883 348 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF169Q14929 603 aaPredicted RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF687Q8N1G0 1237 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 OR6K3Q8NGY3 331 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 DOCK10Q96BY6 2186 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 GDF9O60383 454 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF806P0C7X5 589 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 FAM157BP0CG42 384 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 NOVA1P51513 510 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 C3AR1Q16581 482 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 PLA1AQ53H76 456 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 NLRC3Q7RTR2 1065 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 ZDHHC23Q8IYP9 409 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 SPICQ8N5J4 248 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 OR4D6Q8NGJ1 314 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 FAAP24Q9BTP7 215 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 UNKLQ9H9P5 680 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TICRRQ7Z2Z1 1910 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RGS11O94810 467 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 RPL23AP62750 156 aaKnown RBP5.57□□□□□ -1.52
PRKDC-202ENST00000338368 LRRTM1Q86UE6 522 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM200AQ86VY9 491 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 GVQW1Q8N7I0 195 aa5.57□□□□□ -1.52
PRKDC-202ENST00000338368 TCF20Q9UGU0 1960 aaKnown RBP5.56□□□□□ -1.52
PRKDC-202ENST00000338368 BTBD17A6NE02 478 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 OR5H14A6NHG9 310 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 DEGS1O15121 323 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 ST8SIA3O43173 380 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 GPR137BO60478 399 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 PSMB6P28072 239 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 TSPO2Q5TGU0 170 aa5.56□□□□□ -1.52
PRKDC-202ENST00000338368 SUMF1Q8NBK3 374 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms