RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 P2RX4Q99571 388 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 XRN1Q8IZH2 1706 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NKX2-2O95096 273 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 S1PR4O95977 384 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CD22P20273 847 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ATP6V0CP27449 155 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PSMB4P28070 264 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SPTBN1Q01082 2364 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 MAP1BP46821 2468 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM237AA0A1B0GTK4 181 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM129A0AVI4 362 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZBTB42B2RXF5 422 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SYT5O00445 386 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF354AO60765 605 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 HBZP02008 142 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TNFSF8P32971 234 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PMELP40967 661 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 IL10RBQ08334 325 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF273Q14593 569 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CDK5R1Q15078 307 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC18B1Q6NT16 456 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC35A4Q96G79 324 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 MUS81Q96NY9 551 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM53CQ9NYF3 392 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CNTN3Q9P232 1028 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 C2orf16Q68DN1 1984 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 AKAP6Q13023 2319 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NPIPB8E9PQR5 432 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NPIPB7O75200 414 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CRYBA1P05813 215 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 C1QTNF8P60827 252 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 GAGE13Q4V321 117 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 LINC00696Q6ZRV3 163 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 Q6ZSR9 355 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ANKRD37Q7Z713 158 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC5A8Q8N695 610 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ERGIC1Q969X5 290 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ASCL2Q99929 193 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 BAZ2AQ9UIF9 1905 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM171A2A8MVW0 826 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 GPR25O00155 361 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 MOSPD3O75425 235 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ATP1B1P05026 303 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRA2BP62995 288 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PSG6Q00889 435 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF766Q5HY98 468 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NXNL2Q5VZ03 156 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR52B4Q8NGK2 314 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ABHD3Q8WU67 409 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM38BQ9NVV0 291 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 OSGIN1Q9UJX0 560 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC17A4Q9Y2C5 497 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 KLRG2A4D1S0 409 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NKX2-6A6NCS4 301 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TNFRSF10CO14798 259 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CST7O76096 145 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 C22orf31O95567 290 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CLDN6P56747 220 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLCO4C1Q6ZQN7 724 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NAT8LQ8N9F0 302 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR10X1Q8NGY0 326 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 EMID1Q96A84 441 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A46Q96AG3 418 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 AICDAQ9GZX7 198 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 GABRQQ9UN88 632 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 A0A1B0GVG6 124 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 A1L4Q6 167 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 J3KR12 359 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ADAM20O43506 726 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 KLK2P20151 261 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ICAM3P32942 547 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF345Q14585 488 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ANKRD55Q3KP44 614 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 LCTLQ6UWM7 567 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 WDTC1Q8N5D0 677 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR1P1Q8NH06 330 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF480Q8WV37 535 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 CREG1O75629 220 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF205O95201 554 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR2T7P0C7T2 308 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 LIMS3P0CW19 117 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 LIMS4P0CW20 117 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 FCGR2BP31994 310 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 NMUP48645 174 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 MTPNP58546 118 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 PAPPA-AS1Q5QFB9 102 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 ACSM6Q6P461 480 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 GKN2Q86XP6 184 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR5D13Q8NGL4 314 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 VSTM2AQ8TAG5 236 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 GPR148Q8TDV2 347 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 LENG9Q96B70 501 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 POPDC3Q9HBV1 291 aa5.49□□□□□ -1.53
CDC42BPA-201ENST00000334218 CBLN4Q9NTU7 201 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms