RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 LRRC3CA6NJW4 275 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 SCGNO76038 276 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 RAC3P60763 192 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 ZMYND11Q15326 602 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 AAED1Q7RTV5 226 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 SLC51BQ86UW2 128 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 OR13G1Q8NGZ3 307 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 OR1S1Q8NH92 325 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 DYRK2Q92630 601 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 P4HTMQ9NXG6 502 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 TNFSF18Q9UNG2 199 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 MED13Q9UHV7 2174 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 PCSK5Q92824 1860 aa16.54■□□□□ 0.24
RFTN1-201ENST00000334133 MFSD2BA6NFX1 497 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 KNG1P01042 644 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 IL2RAP01589 272 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 NR2C1P13056 603 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 CTSSP25774 331 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 TUSC1Q2TAM9 212 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 JMJD6Q6NYC1 403 aaPredicted RBP16.53■□□□□ 0.24
RFTN1-201ENST00000334133 SPTSSAQ969W0 71 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 PECRQ9BY49 303 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 CHST5Q9GZS9 411 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 CYC1P08574 325 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 PRF1P14222 555 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 TAF9Q16594 264 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 CEACAM16Q2WEN9 425 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 SLC23A3Q6PIS1 610 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 GPR160Q9UJ42 338 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 MCTS1Q9ULC4 181 aaKnown RBP16.53■□□□□ 0.24
RFTN1-201ENST00000334133 V9GYS6 101 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 IGLV3-1P01715 115 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 THBS4P35443 961 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 RRADP55042 308 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 ARPC4P59998 168 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 FAM27BQ5VT28 67 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 RAB11FIP2Q7L804 512 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 STPG2Q8N412 459 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 GALNT11Q8NCW6 608 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 OR5M9Q8NGP3 310 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 C17orf50Q8WW18 174 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 REEP6Q96HR9 211 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 SGCZQ96LD1 299 aa16.53■□□□□ 0.24
RFTN1-201ENST00000334133 KANTRA0A1W2PQU2 76 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 FAM221AA4D161 298 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 DUS4LO95620 317 aaKnown RBP16.52■□□□□ 0.24
RFTN1-201ENST00000334133 CELA3AP09093 270 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 SRD5A2P31213 254 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 HTR5AP47898 357 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 GSK3AP49840 483 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 ELP2Q6IA86 826 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 CLEC18BQ6UXF7 455 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 PDZD9Q8IXQ8 264 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 PFDN2Q9UHV9 154 aa16.52■□□□□ 0.24
RFTN1-201ENST00000334133 A0A0U1RQV5 110 aa16.52■□□□□ 0.23
RFTN1-201ENST00000334133 OTX1P32242 354 aaPredicted RBP16.52■□□□□ 0.23
RFTN1-201ENST00000334133 FGL1Q08830 312 aa16.52■□□□□ 0.23
RFTN1-201ENST00000334133 C6orf15Q6UXA7 325 aaPredicted RBP16.52■□□□□ 0.23
RFTN1-201ENST00000334133 GPR137CQ8N3F9 429 aa16.52■□□□□ 0.23
RFTN1-201ENST00000334133 THAP6Q8TBB0 222 aa16.52■□□□□ 0.23
RFTN1-201ENST00000334133 GPR132Q9UNW8 380 aa16.52■□□□□ 0.23
RFTN1-201ENST00000334133 IGKV1-27A0A075B6S5 117 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 ZNF716A6NP11 495 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 SPINK2P20155 84 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 AGTR1P30556 359 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 MRPS34P82930 218 aaKnown RBP16.51■□□□□ 0.23
RFTN1-201ENST00000334133 PEAR1Q5VY43 1037 aaPredicted RBP16.51■□□□□ 0.23
RFTN1-201ENST00000334133 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 SEMA6DQ8NFY4 1073 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 HAS2Q92819 552 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 THOC3Q96J01 351 aaKnown RBP16.51■□□□□ 0.23
RFTN1-201ENST00000334133 FAAP24Q9BTP7 215 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 ACKR4Q9NPB9 350 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 PLEKHJ1Q9NW61 149 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 SPEF1Q9Y4P9 236 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 CSAG2Q9Y5P2 127 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 NAT2P11245 290 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 OPRM1P35372 400 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 CYB561P49447 251 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 ARHGDIBP52566 201 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 HIST1H3AP68431 136 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 HIST2H3PS2Q5TEC6 136 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 AADACL3Q5VUY0 350 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 HIST2H3AQ71DI3 136 aa16.51■□□□□ 0.23
RFTN1-201ENST00000334133 RTBDNQ9BSG5 229 aaPredicted RBP16.51■□□□□ 0.23
RFTN1-201ENST00000334133 F5H0A9 414 aaPredicted RBP16.5■□□□□ 0.23
RFTN1-201ENST00000334133 JMJD7P0C870 316 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 MPZP25189 248 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 SUPT4H1P63272 117 aaKnown RBP16.5■□□□□ 0.23
RFTN1-201ENST00000334133 ANKRD55Q3KP44 614 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 TMEM128Q5BJH2 165 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 FOXL2NBQ6ZUU3 175 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 KCNRGQ8N5I3 272 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 OCSTAMPQ9BR26 566 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 IER2Q9BTL4 223 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 CHMP1AQ9HD42 196 aaPredicted RBP16.5■□□□□ 0.23
RFTN1-201ENST00000334133 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PCDHGA1Q9Y5H4 931 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 CFAP47Q6ZTR5 3102 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 GJE1A6NN92 205 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms