RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 GP1BAP07359 652 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 KIR2DS2P43631 304 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 IQCJQ1A5X6 159 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 MYEOVQ96EZ4 313 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 MMP25Q9NPA2 562 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 M0R1X1 148 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 PHOX2AO14813 284 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 PCBP3P57721 371 aaKnown RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 PAX5Q02548 391 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 STUMQ69YW2 141 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 MASP2O00187 686 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 HRASP01112 189 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 HIST1H1DP16402 221 aaKnown RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 CSF2RBP32927 897 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 FFAR4Q5NUL3 377 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 FBXL14Q8N1E6 418 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 NEIL1Q96FI4 390 aaPredicted RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 ALKBH3Q96Q83 286 aaPredicted RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 TAAR9Q96RI9 348 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 SIGLEC7Q9Y286 467 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 TEX50A0A1B0GTY4 177 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 MKRN2OSH3BPM6 223 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 PLPP2O43688 288 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 RAG2P55895 527 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 MYBPHQ13203 477 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 GPR137Q96N19 417 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 S100A4P26447 101 aaKnown RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 C11orf42Q8N5U0 333 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 MYOZ1Q9NP98 299 aaPredicted RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 TMEFF2Q9UIK5 374 aaPredicted RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 KCNE3Q9Y6H6 103 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 ANKRD12Q6UB98 2062 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 NCBP2LA6PVI3 153 aaKnown RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 GPANK1O95872 356 aa18.85■□□□□ 0.61
RNF40-201ENST00000324685 MYPOPQ86VE0 399 aaPredicted RBP18.85■□□□□ 0.61
RNF40-201ENST00000324685 SHISA7A6NL88 538 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 NKX2-2O95096 273 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 ONECUT2O95948 504 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 GALR1P47211 349 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 TRILQ7L0X0 811 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 PRSS42Q7Z5A4 293 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 BCL7CQ8WUZ0 217 aaPredicted RBP18.84■□□□□ 0.61
RNF40-201ENST00000324685 PMCHP20382 165 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 B4GALNT1Q00973 533 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 WDR38Q5JTN6 314 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 UBALD2Q8IYN6 164 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 SPICQ8N5J4 248 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 DOK1Q99704 481 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 RD3LP0DJH9 198 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 TMEM267Q0VDI3 215 aaPredicted RBP18.84■□□□□ 0.61
RNF40-201ENST00000324685 OR4F17Q8NGA8 305 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 LYRM2Q9NU23 88 aaPredicted RBP18.84■□□□□ 0.61
RNF40-201ENST00000324685 TAAR3PQ9P1P4 343 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 TRGV8A0A0C4DH27 118 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 SPTY2D1-AS1A0A0U1RR47 76 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 LIMK1P53667 647 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 SPATA46Q5T0L3 261 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 TDHQ8IZJ6 230 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 SLC45A2Q9UMX9 530 aa18.84■□□□□ 0.61
RNF40-201ENST00000324685 ALG1L2C9J202 215 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 FGF2P09038 288 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 ALKBH6Q3KRA9 238 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 SLIRPQ9GZT3 109 aaKnown RBP18.83■□□□□ 0.61
RNF40-201ENST00000324685 PRDM7Q9NQW5 492 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 PNPP00491 289 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 RFC3P40938 356 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 CCL7P80098 99 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 SLC38A11Q08AI6 406 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 RNPS1Q15287 305 aaKnown RBP18.83■□□□□ 0.61
RNF40-201ENST00000324685 TMEM196Q5HYL7 178 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 COL13A1Q5TAT6 717 aaPredicted RBP18.83■□□□□ 0.61
RNF40-201ENST00000324685 MAP6Q96JE9 813 aa18.83■□□□□ 0.61
RNF40-201ENST00000324685 A0A1B0GTL3 188 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 MBTPS2O43462 519 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 DHRS3O75911 302 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 SPEM1Q8N4L4 309 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 TMEM147Q9BVK8 224 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 TMEM30AQ9NV96 361 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 CBY3A6NI87 242 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 RNF165Q6ZSG1 346 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 KIAA1958Q8N8K9 716 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 LRRC61Q9BV99 259 aa18.83■□□□□ 0.6
RNF40-201ENST00000324685 LMO7DNF2Z398 122 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 CRYABP02511 175 aaKnown RBP18.82■□□□□ 0.6
RNF40-201ENST00000324685 POU2F2P09086 479 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 ZNF117Q03924 483 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 PIK3IP1Q96FE7 263 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 SARGQ9BW04 601 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 FOXQ1Q9C009 403 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.82■□□□□ 0.6
RNF40-201ENST00000324685 SSC5DA1L4H1 1573 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 ADAM20O43506 726 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 SPRY3O43610 288 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 WNT1P04628 370 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 CEACAM6P40199 344 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 RAB7AP51149 207 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 RAE1P78406 368 aaKnown RBP18.82■□□□□ 0.6
RNF40-201ENST00000324685 TMEM97Q5BJF2 176 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 SLC36A1Q7Z2H8 476 aa18.82■□□□□ 0.6
RNF40-201ENST00000324685 OR10V1Q8NGI7 309 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms