RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ACKR3P25106 362 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 PTGDSP41222 190 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 RAP1BP61224 184 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 RAP1AP62834 184 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 SGCAQ16586 387 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 NCMAPQ5T1S8 102 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF561Q8N587 486 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 WDSUB1Q8N9V3 476 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 CACFD1Q9UGQ2 172 aa13.72□□□□□ -0.21
SHROOM1-201ENST00000319854 A0A1W2PPH5 198 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 SYT7O43581 403 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 CD5P06127 495 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF14P17017 642 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF43P17038 809 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 HSD11B1P28845 292 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 PRSS12P56730 875 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 KRBOX4Q5JUW0 171 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 OR52N4Q8NGI2 321 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 ADAT3Q96EY9 351 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 CFAP47Q6ZTR5 3102 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 LRP3O75074 770 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 GPX4P36969 197 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 OR2B8PP59922 312 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 NAAAQ02083 359 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF385CQ66K41 422 aaPredicted RBP13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 LRRC18Q8N456 261 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 TMEM156Q8N614 296 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
SHROOM1-201ENST00000319854 NUDT19A8MXV4 375 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 FCGR3AP08637 254 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 RNF224P0DH78 156 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 CCL3P10147 92 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 DRAM2Q6UX65 266 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 ABHD12BQ7Z5M8 362 aaPredicted RBP13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 SMIM8Q96KF7 97 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 SULT4A1Q9BR01 284 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 PRO3102Q9H379 93 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF160Q9HCG1 818 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 ALKBH4Q9NXW9 302 aa13.71□□□□□ -0.22
SHROOM1-201ENST00000319854 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 ADAP1O75689 374 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 STK17BO94768 372 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 SNRNP70P08621 437 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 CLDN17P56750 224 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 RNF212Q495C1 297 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 OR5D18Q8NGL1 313 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 OR10S1Q8NGN2 331 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 B3GALT5Q9Y2C3 310 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 CPAMD8Q8IZJ3 1885 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 TRBV6-7A0A0A0MS04 114 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 TOX3O15405 576 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 QDPRP09417 244 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 SELLP14151 372 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF584Q8IVC4 421 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 OR2M3Q8NG83 312 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 OR2AJ1Q8NGZ0 328 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 ADAMTS17Q8TE56 1095 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 UCN2Q96RP3 112 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 PARP12Q9H0J9 701 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 CNTD2Q9H8S5 307 aa13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 GDF2Q9UK05 429 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-201ENST00000319854 CACNA1HO95180 2353 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF726A6NNF4 738 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 MED6O75586 246 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 CFPP27918 469 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 TMEM244Q5VVB8 128 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 ADAM5Q6NVV9 412 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 FJX1Q86VR8 437 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 GGACTQ9BVM4 153 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 PBOV1Q9GZY1 135 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC17A5Q9NRA2 495 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 DOCK7Q96N67 2140 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 TTRP02766 147 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 OTX2P32243 289 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 EIF2S3P41091 472 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 PNLIPRP3Q17RR3 467 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 FAM76BQ5HYJ3 339 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF468Q5VIY5 522 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 OR51F2Q8NH61 342 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 KIRREL1Q96J84 757 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 MRGPRX4Q96LA9 322 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 TIMM10BQ9Y5J6 103 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 C5orf63A6NC05 138 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 IGHG1P01857 330 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 ARG1P05089 322 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 HRH1P35367 487 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 SLC6A9P48067 706 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 ZNF101Q8IZC7 436 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 NAT6Q93015 286 aa13.69□□□□□ -0.22
SHROOM1-201ENST00000319854 LHFPL6Q9Y693 200 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms