RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SMIM3Q9BZL3 60 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 TMED7Q9Y3B3 224 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 FLNCQ14315 2725 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 TVP23AA6NH52 213 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 CTAG2O75638 210 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 RPP14O95059 124 aaKnown RBP8.32□□□□□ -1.08
CAPN3-201ENST00000318023 F13BP05160 661 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 SELEP16581 610 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 CARD18P57730 90 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 SRSF4Q08170 494 aaKnown RBP8.32□□□□□ -1.08
CAPN3-201ENST00000318023 ST3GAL3Q11203 375 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 GAGE1Q13065 139 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 MED27Q6P2C8 311 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 WDR88Q6ZMY6 472 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 VN1R4Q7Z5H5 301 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 OR52L1Q8NGH7 329 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 OR13C8Q8NGS7 320 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 PHB2Q99623 299 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 NELFAQ9H3P2 528 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 SIRT3Q9NTG7 399 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF346Q9UL40 294 aaKnown RBP8.32□□□□□ -1.08
CAPN3-201ENST00000318023 TCFL5Q9UL49 500 aa8.32□□□□□ -1.08
CAPN3-201ENST00000318023 A0A087WUJ7 227 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 OGG1O15527 345 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 C1QL1O75973 258 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ZFPL1O95159 310 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 WNT11O96014 354 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 PGA4P0DJD7 388 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 PGA5P0DJD9 388 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 S1PR1P21453 382 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 CEACAM8P31997 349 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-201ENST00000318023 OR5I1Q13606 314 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 PNLIPRP3Q17RR3 467 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF774Q6NX45 483 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 KMT5CQ86Y97 462 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 OR13C9Q8NGT0 318 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 PFN4Q8NHR9 129 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 MYNNQ9NPC7 610 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 INPP5EQ9NRR6 644 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 C20orf141Q9NUB4 165 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 KCNE3Q9Y6H6 103 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 CENPEQ02224 2701 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TRAV27A0A087WT01 109 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 A0A1B0GX78 115 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 IFNL4K9M1U5 179 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TP53I11O14683 189 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 AMBPP02760 352 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 CELA2AP08217 269 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF888P0CJ79 500 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ZBTB25P24278 435 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 SNCAP37840 140 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 GABRA4P48169 554 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TFPI2P48307 235 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 SULT1A2P50226 295 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 NANOS3P60323 173 aaKnown RBP8.31□□□□□ -1.08
CAPN3-201ENST00000318023 BTN3A2P78410 334 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 FUT5Q11128 374 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 LASP1Q14847 261 aaKnown RBP8.31□□□□□ -1.08
CAPN3-201ENST00000318023 HERPUD1Q15011 391 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TMEM205Q6UW68 189 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 DNM1P46Q6ZS02 220 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 UBE3DQ7Z6J8 389 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 KDM8Q8N371 416 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 HSD17B11Q8NBQ5 300 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ADAD2Q8NCV1 583 aaKnown RBP8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TERB2Q8NHR7 220 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 STT3BQ8TCJ2 826 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 SFXN5Q8TD22 340 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 SLC35G5Q96KT7 338 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 SLC7A7Q9UM01 511 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 BAHCC1Q9P281 2608 aa8.31□□□□□ -1.08
CAPN3-201ENST00000318023 TRAV8-7A0A075B6U6 113 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 BHLHE40O14503 412 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ERI3O43414 337 aaKnown RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF354AO60765 605 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 CALCBP10092 127 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 KLK2P20151 261 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 NPY4RP50391 375 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ZNF627Q7L945 461 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 GDF7Q7Z4P5 450 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 THAP3Q8WTV1 239 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 HPSE2Q8WWQ2 592 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 MRGPRX4Q96LA9 322 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 SLC25A21Q9BQT8 299 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 LPAR2Q9HBW0 351 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 DMRT3Q9NQL9 472 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 PARP11Q9NR21 331 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ZCCHC3Q9NUD5 404 aaKnown RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 PCNX1Q96RV3 2341 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 GLOD5A6NK44 160 aa8.3□□□□□ -1.08
CAPN3-201ENST00000318023 PRKNO60260 465 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-201ENST00000318023 ZIC2O95409 532 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms