RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 GPM6AP51674 278 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR8B8Q15620 311 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR2A2Q6IF42 318 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 CD200R1LQ6Q8B3 271 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 PPP1R3EQ9H7J1 279 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 HEATR5BQ9P2D3 2071 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 LRP5LA4QPB2 252 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 PDGFAP04085 211 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 CD1AP06126 327 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 PPP1R1CQ8WVI7 109 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 RTN4IP1Q8WWV3 396 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGKV1D-42A0A075B6H8 117 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 H3BMH7 237 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 GMDSO60547 372 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ALX3O95076 343 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF14P17017 642 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 IL11P20809 199 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 NKX2-1P43699 371 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 INPP5JQ15735 1006 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 SFRP5Q5T4F7 317 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR1J1Q8NGS3 322 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 RIMS4Q9H426 269 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 PCDHB10Q9UN67 800 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ARPC4-TTLL3A0A0A6YYG9 625 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 DUSP1P28562 367 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 CD96P40200 585 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 PIGPP57054 158 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 KRBOX4Q5JUW0 171 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 DCAF10Q5QP82 559 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 SHEQ5VZ18 495 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 TMEM217Q8N7C4 229 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 KISS1RQ969F8 398 aaPredicted RBP10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 SRCAPQ6ZRS2 3230 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 TGFBR3LH3BV60 316 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 TOR1AO14656 332 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 KLF4O43474 513 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 DNPH1O43598 174 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 CDC14BO60729 498 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 WDR1O75083 606 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 GLRA1P23415 457 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 AVPR2P30518 371 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 PTGER4P35408 488 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF266Q14584 549 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR13C8Q8NGS7 320 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 FLVCR1-AS1Q8TAF5 88 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 GPX8Q8TED1 209 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 SLC23A1Q9UHI7 598 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF891A8MT65 544 aaPredicted RBP10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 CLDN1O95832 211 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGF2P01344 180 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 GP1BAP07359 652 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 GNG3P63215 75 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 HBG1P69891 147 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 HBG2P69892 147 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZDHHC22Q8N966 263 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 RBPMSQ93062 196 aaKnown RBP10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 CHST6Q9GZX3 395 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 SF3B6Q9Y3B4 125 aaKnown RBP10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 MEIKINA0A087WXM9 373 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 MAGEA5P43359 124 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 PRSS12P56730 875 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 FAM213BQ8TBF2 198 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 EXTL1Q92935 676 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF385AQ96PM9 386 aaKnown RBP10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 SPSB2Q99619 263 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF649Q9BS31 505 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 HS3ST3B1Q9Y662 390 aa10.11□□□□□ -0.79
PCDHGC3-201ENST00000308177 TSC2P49815 1807 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 GPR179Q6PRD1 2367 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 DNAJC13O75165 2243 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PTPRDP23468 1912 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGHV1-45A0A0A0MS14 117 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 TIAF1O95411 115 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 S100PP25815 95 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 EXOSC2Q13868 293 aaKnown RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 MUC20Q8N307 709 aaPredicted RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ST6GAL2Q96JF0 529 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PGLYRP3Q96LB9 341 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 A0A0J9YW62 118 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 TPPPO94811 219 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 KIR3DL2P43630 455 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 RAB5BP61020 215 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 DHRS2Q13268 280 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PDCD1Q15116 288 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR2T2Q6IF00 324 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF529Q6P280 563 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 C20orf196Q8IYI0 205 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 SVBPQ8N300 66 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ABHD3Q8WU67 409 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 DECR2Q9NUI1 292 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF230Q9UIE0 474 aaPredicted RBP10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 PRELID3BQ9Y3B1 194 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 LRRC30A6NM36 301 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 NPIPB9F8W1W9 429 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 SNAPINO95295 136 aa10.1□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF17P17021 662 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms