RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 ARRDC3Q96B67 414 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 RBM38Q9H0Z9 239 aaKnown RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 DECR2Q9NUI1 292 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 PDXPQ96GD0 296 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 SP1P08047 785 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 OTX2P32243 289 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 ARR3P36575 388 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 RIPPLY2Q5TAB7 128 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 PRSS50Q9UI38 385 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 LOC102724200A0A096LPH7 203 aaPredicted RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 TRBV9A0A0B4J1U6 114 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 PRDX1Q06830 199 aaKnown RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 DUSP5Q16690 384 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 GALMQ96C23 342 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 GYPAP02724 150 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 LINC00518Q8N0U6 118 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 CTDSPLO15194 276 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 ENSAO43768 121 aaKnown RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 ZNF217O75362 1048 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 JOSD1Q15040 202 aaPredicted RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 TUSC1Q2TAM9 212 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 OR1L1Q8NH94 360 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 MEX3DQ86XN8 651 aaKnown RBP17.5■□□□□ 0.39
BPTF-201ENST00000306378 IL17FQ96PD4 163 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 A0A1B0GV90 55 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 SPNP16150 400 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 ZNF542PQ5EBM4 170 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 OR52N4Q8NGI2 321 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 CHST11Q9NPF2 352 aa17.5■□□□□ 0.39
BPTF-201ENST00000306378 CD1CP29017 333 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CST6Q15828 149 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 LRRC15Q8TF66 581 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CA5BP1Q8WTZ4 195 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 VAX2Q9UIW0 290 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 EXOSC7Q15024 291 aaKnown RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 STXBP6Q8NFX7 210 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 RPL11P62913 178 aaKnown RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 CPEB2Q7Z5Q1 589 aaKnown RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 TMEM70Q9BUB7 260 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 DSCR3O14972 297 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 FREM1Q5H8C1 2179 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CSNK1EP49674 416 aaKnown RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 METAP1P53582 386 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CLDN15P56746 228 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 CTBSQ01459 385 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 GREB1Q4ZG55 1949 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 IGFBP4P22692 258 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 ST3GAL2Q16842 350 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 MRGPRGQ86SM5 289 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 UBE2ZQ9H832 354 aaPredicted RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 RPS4Y1P22090 263 aaKnown RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 P2RY1P47900 373 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 MZB1Q8WU39 189 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 SEBOXQ9HB31 216 aaPredicted RBP17.49■□□□□ 0.39
BPTF-201ENST00000306378 FTSJ1Q9UET6 329 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 AMDHD2Q9Y303 409 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 FLT3LGP49771 235 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 OR1L4Q8NGR5 311 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 HSD17B8Q92506 261 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 RAB37Q96AX2 223 aa17.49■□□□□ 0.39
BPTF-201ENST00000306378 PTPRFP10586 1907 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 OR2T8A6NH00 312 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 ZNF355PQ9NSJ1 428 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 SLCO2B1O94956 709 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 HNRNPA1L2Q32P51 320 aaKnown RBP17.48■□□□□ 0.39
BPTF-201ENST00000306378 CD99L2Q8TCZ2 262 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 DUSP23Q9BVJ7 150 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 AUNIPQ9H7T9 357 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 NEURL1O76050 574 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 CA2P00918 260 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 HLA-DQA1P01909 254 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 APCSP02743 223 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 HOXC5Q00444 222 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 KCNE4Q8WWG9 221 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 OR52B4Q8NGK2 314 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 CD226Q15762 336 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 TMEM176BQ3YBM2 270 aaPredicted RBP17.48■□□□□ 0.39
BPTF-201ENST00000306378 FAM169BQ8N8A8 192 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 TMED7Q9Y3B3 224 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 COL6A6A6NMZ7 2263 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 PIK3IP1Q96FE7 263 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 TREM2Q9NZC2 230 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 ACACAQ13085 2346 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 POLR2IP36954 125 aaKnown RBP17.48■□□□□ 0.39
BPTF-201ENST00000306378 LYSMD4Q5XG99 296 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 OR5AS1Q8N127 324 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 MUC20Q8N307 709 aaPredicted RBP17.48■□□□□ 0.39
BPTF-201ENST00000306378 OR4F17Q8NGA8 305 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 PERPQ96FX8 193 aa17.48■□□□□ 0.39
BPTF-201ENST00000306378 TCRBV5S2A0A599 114 aa17.47■□□□□ 0.39
BPTF-201ENST00000306378 UTS2O95399 124 aa17.47■□□□□ 0.39
BPTF-201ENST00000306378 ST8SIA1Q92185 356 aa17.47■□□□□ 0.39
BPTF-201ENST00000306378 LCORQ96JN0 433 aaPredicted RBP17.47■□□□□ 0.39
BPTF-201ENST00000306378 PTPRDP23468 1912 aa17.47■□□□□ 0.39
BPTF-201ENST00000306378 A0A1W2PQU0 124 aa17.47■□□□□ 0.39
BPTF-201ENST00000306378 OR2W5A6NFC9 320 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms