RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TAAR5O14804 337 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 DOK2O60496 412 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 TMEM127O75204 238 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 GPANK1O95872 356 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 IGHEP01854 428 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 ZNF705DP0CH99 300 aaPredicted RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 ZNF705BP0CI00 300 aaPredicted RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 NANOS3P60323 173 aaKnown RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 SSBP1Q04837 148 aaKnown RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 RAB32Q13637 225 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 ZNF160Q9HCG1 818 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 ZNF318Q5VUA4 2279 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 TMEM212A6NML5 194 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 H7C1C5 153 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 HRH1P35367 487 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 IDH3GP51553 393 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 LCN6P62502 163 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 VAMP2P63027 116 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ZFP36L1Q07352 338 aaKnown RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 RASGEF1BQ0VAM2 473 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 PMPCAQ10713 525 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 IAH1Q2TAA2 248 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 CDPF1Q6NVV7 123 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 LRRC69Q6ZNQ3 347 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ANKRD37Q7Z713 158 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 FJX1Q86VR8 437 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 OR1N1Q8NGS0 311 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 PMM1Q92871 262 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 FOXN4Q96NZ1 517 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SPOCK3Q9BQ16 436 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 FBXO34Q9NWN3 711 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 PPP1R14DQ9NXH3 145 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 C14orf166Q9Y224 244 aaKnown RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 VSIG4Q9Y279 399 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SVILO95425 2214 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 A0A1B0GWA3 101 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 J3QRE1 110 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 DFFBO76075 338 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SCGB1D1O95968 90 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 RPL12P30050 165 aaKnown RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 EMDP50402 254 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 CTXN1P60606 82 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 FUT5Q11128 374 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 TCF15Q12870 199 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 BCORP1Q8N888 145 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ZNF321PQ8N8H1 164 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ZSCAN4Q8NAM6 433 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 SEH1LQ96EE3 360 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 METTL9Q9H1A3 318 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 HAO2Q9NYQ3 351 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 GRHPRQ9UBQ7 328 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 TMEM14AQ9Y6G1 99 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ZNF727A8MUV8 499 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 TGOLN2O43493 480 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 NKX2-2O95096 273 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 UTS2O95399 124 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 ADRA2CP18825 462 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 AMY2BP19961 511 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
LSM3-201ENST00000306024 UBE2V2Q15819 145 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 PRSS54Q6PEW0 395 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 C16orf47Q6ZP98 133 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 SLC43A2Q8N370 569 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 GPX8Q8TED1 209 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 PTPMT1Q8WUK0 201 aaPredicted RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 ROBO4Q8WZ75 1007 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 MARS2Q96GW9 593 aaKnown RBP9.69□□□□□ -0.86
LSM3-201ENST00000306024 GPER1Q99527 375 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 CHST5Q9GZS9 411 aa9.69□□□□□ -0.86
LSM3-201ENST00000306024 DUS4LO95620 317 aaKnown RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 CXCR1P25024 350 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 SLC35D2Q76EJ3 337 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ZNF283Q8N7M2 679 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OR10AC1Q8NH08 325 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 FNDC9Q8TBE3 224 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 LRFN5Q96NI6 719 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ELL3Q9HB65 397 aaPredicted RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 MSGN1A6NI15 193 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 PTBP3O95758 552 aaKnown RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 CST4P01036 141 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 IGHV2-5P01817 119 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 GP1BBP13224 206 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 RPP30P78346 268 aaKnown RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 MOGAT2Q3SYC2 334 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ABHD17BQ5VST6 288 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OTPQ5XKR4 325 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 SLC25A42Q86VD7 318 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OR13C3Q8NGS6 347 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OR2Y1Q8NGV0 311 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 CT55Q8WUE5 264 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 SNX22Q96L94 193 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ELOVL3Q9HB03 270 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms