RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 OR7D2Q96RA2 312 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 RTP3Q9BQQ7 232 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 NKX2-4Q9H2Z4 354 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 CNTD2Q9H8S5 307 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 NPDC1Q9NQX5 325 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 ING1Q9UK53 422 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 ATXN7L1Q9ULK2 861 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TRBV4-1A0A0J9YWV2 114 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TLCD2A6NGC4 264 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 DHRS3O75911 302 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 NXPH2O95156 264 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 CYBAP13498 195 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 NPBWR2P48146 333 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TNFSF10P50591 281 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 RPL27P61353 136 aaKnown RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 SRSF5Q13243 272 aaKnown RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TMEM176BQ3YBM2 270 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TREML2Q5T2D2 321 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 PAQR6Q6TCH4 344 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 SUSD1Q6UWL2 747 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 BTLAQ7Z6A9 289 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 SLC39A11Q8N1S5 342 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 OR2A1Q8NGT9 310 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 OR5AK3PQ8NH89 298 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 SH3RF2Q8TEC5 729 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 CLEC4CQ8WTT0 213 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 SEC22AQ96IW7 307 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TTTY10Q9BZA0 68 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 TMEM231Q9H6L2 316 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 ESRP2Q9H6T0 727 aaKnown RBP4.75□□□□□ -1.65
SCN1A-201ENST00000303395 PGPEP1Q9NXJ5 209 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 RHBDD3Q9Y3P4 386 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 RALGAPA2Q2PPJ7 1873 aa4.75□□□□□ -1.65
SCN1A-201ENST00000303395 DNAL4O96015 105 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 OPN1LWP04000 364 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 SBK3P0C264 359 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ACKR3P25106 362 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 HOXA6P31267 233 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PNLIPRP2P54317 469 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ELAVL1Q15717 326 aaKnown RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 IZUMO4Q1ZYL8 232 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ZNF573Q86YE8 665 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 OR4K13Q8NH42 304 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ADGRG7Q96K78 797 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 KCNK12Q9HB15 430 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 STARD5Q9NSY2 213 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 FBXO34Q9NWN3 711 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 CD207Q9UJ71 328 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 LSM2Q9Y333 95 aaKnown RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PTGESO14684 152 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PDGFBP01127 241 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 DRD5P21918 477 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ACVR1BP36896 505 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PPICP45877 212 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MFAP4P55083 255 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 DLX1P56177 255 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 C17orf67Q0P5P2 114 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 HLA-BQ31612 363 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 OR4A47Q6IF82 309 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ALKAL2Q6UX46 152 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MDGA1Q8NFP4 955 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 OR51A7Q8NH64 312 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 BCL2L2Q92843 193 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 TMEM230Q96A57 120 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 SPAG8Q99932 426 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 GPR61Q9BZJ8 451 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 SLC25A37Q9NYZ2 338 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 H3BQ06 376 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 COCHO43405 550 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ZNF324O75467 553 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ANKRD34CP0C6C1 535 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ZXDBP98169 803 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 KIAA0040Q15053 153 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 ACER2Q5QJU3 275 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 C9orf135Q5VTT2 229 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MACROD1Q9BQ69 325 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 SFXN1Q9H9B4 322 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 USP36Q9P275 1121 aaKnown RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PLEKHB1Q9UF11 243 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 A0A1W2PPQ1 181 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PRAMEF27A3QJZ7 478 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 CYR61O00622 381 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MPC2O95563 127 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 GHRHP01286 108 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 NMBP08949 121 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 C19orf54Q5BKX5 351 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 FFAR4Q5NUL3 377 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PRAMEF9Q5VWM5 478 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 OR8B4Q96RC9 309 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 COL5A3P25940 1745 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PCNX1Q96RV3 2341 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 A0A0B4J2E0 115 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 A0A1B0GX12 115 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 FAM72CH0Y354 149 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 GALR2O43603 387 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-201ENST00000303395 SFT2D2O95562 160 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MPIG6BO95866 241 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 VDAC1P21796 283 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 MMP16P51512 607 aa4.74□□□□□ -1.65
SCN1A-201ENST00000303395 PPP1CBP62140 327 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms