RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 ST6GALNAC2Q9UJ37 374 aa17.24■□□□□ 0.35
TSR1-201ENST00000301364 CDC14BO60729 498 aa17.24■□□□□ 0.35
TSR1-201ENST00000301364 PRAMEF5Q5TYX0 476 aa17.24■□□□□ 0.35
TSR1-201ENST00000301364 PRAMEF6Q5VXH4 476 aa17.24■□□□□ 0.35
TSR1-201ENST00000301364 TMEM123Q8N131 208 aa17.24■□□□□ 0.35
TSR1-201ENST00000301364 APOBEC3DQ96AK3 386 aaPredicted RBP17.24■□□□□ 0.35
TSR1-201ENST00000301364 CIB3Q96Q77 187 aaPredicted RBP17.24■□□□□ 0.35
TSR1-201ENST00000301364 RCL1Q9Y2P8 373 aaKnown RBP17.24■□□□□ 0.35
TSR1-201ENST00000301364 CELA2BP08218 269 aaPredicted RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 NTNG2Q96CW9 530 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 PIK3IP1Q96FE7 263 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 MAGT1Q9H0U3 335 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 C5orf67F2Z3F1 127 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 OR2B8PP59922 312 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 CLPPQ16740 277 aaPredicted RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 LANCL1O43813 399 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 LGALSLQ3ZCW2 172 aaPredicted RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 ZNF787Q6DD87 383 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 ROBO4Q8WZ75 1007 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 TRAF4Q9BUZ4 470 aaPredicted RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 FAM234AQ9H0X4 552 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 PCDHGA9Q9Y5G4 932 aaKnown RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 SIRPB1O00241 398 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 PEBP1P30086 187 aaKnown RBP17.23■□□□□ 0.35
TSR1-201ENST00000301364 RNF212Q495C1 297 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 EXTL1Q92935 676 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 CRLF2Q9HC73 371 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 LAMP3Q9UQV4 416 aa17.23■□□□□ 0.35
TSR1-201ENST00000301364 ASCC3Q8N3C0 2202 aaKnown RBP17.22■□□□□ 0.35
TSR1-201ENST00000301364 RAB27BO00194 218 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 SFTA3P0C7M3 94 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 KIR2DL1P43626 348 aaPredicted RBP17.22■□□□□ 0.35
TSR1-201ENST00000301364 GGTLC2Q14390 218 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 CD200R1LQ6Q8B3 271 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 NUBPLQ8TB37 319 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 ACTR3CQ9C0K3 210 aaPredicted RBP17.22■□□□□ 0.35
TSR1-201ENST00000301364 TRIM64BA6NI03 449 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 EML2O95834 649 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 SKP2Q13309 424 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 JMJD6Q6NYC1 403 aaPredicted RBP17.22■□□□□ 0.35
TSR1-201ENST00000301364 RXFP4Q8TDU9 374 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 PRSS27Q9BQR3 290 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 B3GALNT1O75752 331 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 GLRA1P23415 457 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 KCNJ3P48549 501 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 RAB32Q13637 225 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 SARGQ9BW04 601 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 PSENENQ9NZ42 101 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 MPZL1O95297 269 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 MYF5P13349 255 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 ACAA2P42765 397 aaKnown RBP17.22■□□□□ 0.35
TSR1-201ENST00000301364 AKR1E2Q96JD6 320 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 SIPA1L1O43166 1804 aa17.22■□□□□ 0.35
TSR1-201ENST00000301364 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 ETFDHQ16134 617 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 ARSJQ5FYB0 599 aaPredicted RBP17.21■□□□□ 0.35
TSR1-201ENST00000301364 ASB10Q8WXI3 467 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 C12orf57Q99622 126 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 ZPBPQ9BS86 351 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 PGA3P0DJD8 388 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 CT45A8P0DMV1 189 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 CT45A9P0DMV2 189 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 SLC37A1P57057 533 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 GUK1Q16774 197 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 CT45A2Q5DJT8 189 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 OR6X1Q8NH79 312 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 HPSE2Q8WWQ2 592 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 SIRT4Q9Y6E7 314 aaPredicted RBP17.21■□□□□ 0.35
TSR1-201ENST00000301364 IL11RAQ14626 422 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 SURF2Q15527 256 aaPredicted RBP17.21■□□□□ 0.35
TSR1-201ENST00000301364 BAGE3Q86Y29 109 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 BAGE2Q86Y30 109 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 DVL1P1P54792 670 aaPredicted RBP17.21■□□□□ 0.35
TSR1-201ENST00000301364 C1QL3Q5VWW1 255 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 LOXL2Q9Y4K0 774 aa17.21■□□□□ 0.35
TSR1-201ENST00000301364 INSM1Q01101 510 aaPredicted RBP17.2■□□□□ 0.34
TSR1-201ENST00000301364 RBMXL3Q8N7X1 1067 aaKnown RBP17.2■□□□□ 0.34
TSR1-201ENST00000301364 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 IGHV1OR15-9A0A0B4J2B8 117 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 COX5AP20674 150 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 CSF2RBP32927 897 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 NXPH1P58417 271 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 ENDOGQ14249 297 aaKnown RBP17.2■□□□□ 0.34
TSR1-201ENST00000301364 OR8B8Q15620 311 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 RPS4Y2Q8TD47 263 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 ZNF426Q9BUY5 554 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 IGKV1-8A0A0C4DH67 115 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 OR3A4PP47883 348 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 SP6Q3SY56 376 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 RHBDD2Q6NTF9 364 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 GVQW1Q8N7I0 195 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 CACFD1Q9UGQ2 172 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 ARID2Q68CP9 1835 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 PMS2P1A4D2B8 440 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 NKX6-3A6NJ46 265 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 TVP23CQ96ET8 276 aa17.2■□□□□ 0.34
TSR1-201ENST00000301364 CABLES2Q9BTV7 478 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms