RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 AKR1D1P51857 326 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 STOML3Q8TAV4 291 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 ARL11Q969Q4 196 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 SLC26A1Q9H2B4 701 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 FANCFQ9NPI8 374 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 TRBV6-7A0A0A0MS04 114 aa21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 RPS2P15880 293 aaKnown RBP21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 RPL35P42766 123 aaKnown RBP21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 RSPO1Q2MKA7 263 aaPredicted RBP21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 PRSS54Q6PEW0 395 aa21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 SVBPQ8N300 66 aa21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 GPR173Q9NS66 373 aa21.39■■□□□ 1.01
SPTSSA-201ENST00000298130 FAM221AA4D161 298 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 CYCSP99999 105 aaKnown RBP21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 KMT5CQ86Y97 462 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 CARFQ8N187 725 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 S100A13Q99584 98 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 RAB18Q9NP72 206 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 RAB19A4D1S5 217 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 SPRY1O43609 319 aaPredicted RBP21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 SCGB1D2O95969 90 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 PATE4P0C8F1 98 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 OPRM1P35372 400 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 PI4KAP42356 2102 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 PDCD1Q15116 288 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 SNAI3Q3KNW1 292 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 SP6Q3SY56 376 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 LHFPL1Q86WI0 220 aa21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 ZNF2Q9BSG1 426 aaPredicted RBP21.38■■□□□ 1.01
SPTSSA-201ENST00000298130 AQP7P3A6NL99 342 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 ETV2O00321 342 aaPredicted RBP21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 CSNK1A1P48729 337 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 SLC25A53Q5H9E4 307 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 RAET1LQ5VY80 246 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 CNTNAP3BQ96NU0 1288 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 IGHV5-10-1A0A0J9YXX1 117 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 ZNHIT1O43257 154 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 SIGLEC6O43699 453 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 MSX1P28360 303 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 GUCA1AP43080 201 aaPredicted RBP21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 PEG10Q86TG7 708 aaKnown RBP21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 ANAPC10Q9UM13 185 aa21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 CHCHD2Q9Y6H1 151 aaPredicted RBP21.37■■□□□ 1.01
SPTSSA-201ENST00000298130 MUC1P15941 1255 aaPredicted RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 POC1AQ8NBT0 407 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 SSC4DQ8WTU2 575 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 CCDC74BQ96LY2 380 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 PHF7Q9BWX1 381 aaPredicted RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 TMEM100Q9NV29 134 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 PLEK2Q9NYT0 353 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 MSTNO14793 375 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 LPAR6P43657 344 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 ENDOGQ14249 297 aaKnown RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 TAF9Q16594 264 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 HIST3H3Q16695 136 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 IAH1Q2TAA2 248 aaPredicted RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 UQCC3Q6UW78 93 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 Q7L0L9 218 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 ZFP82Q8N141 532 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 SEMA6DQ8NFY4 1073 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 SLC22A8Q8TCC7 542 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 C2CD4CQ8TF44 421 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 TOMM40LQ969M1 308 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 C2orf50Q96LR7 162 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 FAAP24Q9BTP7 215 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 SLC5A7Q9GZV3 580 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 PLEKHJ1Q9NW61 149 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 MLXQ9UH92 298 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 CEP192Q8TEP8 1941 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 SPEM2Q0P670 501 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 ETV3LQ6ZN32 361 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 IQCF2Q8IXL9 164 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 RNF138Q8WVD3 245 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 NUDT16L1Q9BRJ7 211 aaKnown RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 LIME1Q9H400 295 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 UQCC1Q9NVA1 299 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 PLA2G2EQ9NZK7 142 aa21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 LSM5Q9Y4Y9 91 aaKnown RBP21.36■■□□□ 1.01
SPTSSA-201ENST00000298130 FAM230AA0A1W2PPH8 454 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 H7C2Y5 167 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 MED6O75586 246 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 CSTBP04080 98 aaKnown RBP21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 TMEM225BP0DP42 221 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 CCL1P22362 96 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 AKR1C3P42330 323 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 ECH1Q13011 328 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 PNLIPRP3Q17RR3 467 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 CCDC157Q569K6 752 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 TSPO2Q5TGU0 170 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 NECAB3Q96P71 396 aaPredicted RBP21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 CCL3P10147 92 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 PVALBP20472 110 aaPredicted RBP21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 MSR1P21757 451 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 RHOFQ9HBH0 211 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 LPAR3Q9UBY5 353 aa21.35■■□□□ 1.01
SPTSSA-201ENST00000298130 COL6A3P12111 3177 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 GRB2P62993 217 aaKnown RBP21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 RBM39Q14498 530 aaKnown RBP21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 ACTBL2Q562R1 376 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms