RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 GABRA6Q16445 453 aa13.28□□□□□ -0.28
SEC16A-202ENST00000290037 ICOSLGO75144 302 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 MPDU1O75352 247 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 MRM1Q6IN84 353 aaKnown RBP13.27□□□□□ -0.28
SEC16A-202ENST00000290037 ZNF683Q8IZ20 524 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 ABHD1Q96SE0 405 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 TSPAN7P41732 249 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 AGFG1P52594 562 aaKnown RBP13.27□□□□□ -0.28
SEC16A-202ENST00000290037 TRIM61Q5EBN2 209 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 C8orf82Q6P1X6 216 aaPredicted RBP13.27□□□□□ -0.28
SEC16A-202ENST00000290037 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.27□□□□□ -0.28
SEC16A-202ENST00000290037 OGG1O15527 345 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 EXOSC2Q13868 293 aaKnown RBP13.27□□□□□ -0.28
SEC16A-202ENST00000290037 NLGN4XQ8N0W4 816 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 CLDN23Q96B33 292 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 ANGPTL4Q9BY76 406 aa13.27□□□□□ -0.28
SEC16A-202ENST00000290037 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 ST7LQ8TDW4 575 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 PSENENQ9NZ42 101 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 HSD17B6O14756 317 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF439Q8NDP4 499 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 COPS9Q8WXC6 57 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 DNAJB12Q9NXW2 375 aaKnown RBP13.27□□□□□ -0.29
SEC16A-202ENST00000290037 PDCD6O75340 191 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 RAC3P60763 192 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM99Q8N816 258 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 PERPQ96FX8 193 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 AGRPO00253 132 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 CNIH1O95406 144 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 GABRA1P14867 456 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 ADGRL4Q9HBW9 690 aa13.27□□□□□ -0.29
SEC16A-202ENST00000290037 DGCR2P98153 550 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM9BQ9NQ34 198 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 PRDM7Q9NQW5 492 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 HIF1ANQ9NWT6 349 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CHST2Q9Y4C5 530 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 LRP3O75074 770 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 ADAM11O75078 769 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 ATXN7L1Q9ULK2 861 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-202ENST00000290037 TXNDC12O95881 172 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 GLRA1P23415 457 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF121P58317 390 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-202ENST00000290037 TXNL1O43396 289 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 AKR7A3O95154 331 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CLEC18AA5D8T8 446 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 SLC31A2O15432 143 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 SSSCA1O60232 199 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF90Q03938 601 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CLEC18CQ8NCF0 446 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 OR8U1Q8NH10 309 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 OR4F5Q8NH21 305 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 NTN4Q9HB63 628 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 UQCC1Q9NVA1 299 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CLDN34H7C241 214 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 PRRX1P54821 245 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 HLXQ14774 488 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CYTIPO60759 359 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CTSVO60911 334 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 GAPDHP04406 335 aaKnown RBP13.26□□□□□ -0.29
SEC16A-202ENST00000290037 AKR1C3P42330 323 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 OR1L1Q8NH94 360 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 RAB24Q969Q5 203 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
SEC16A-202ENST00000290037 C4orf45Q96LM5 186 aa13.26□□□□□ -0.29
SEC16A-202ENST00000290037 CDC14CA4D256 554 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 SBK3P0C264 359 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 FSTP19883 344 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 KIAA0040Q15053 153 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 A0A1B0GU03 582 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 SFT2D2O95562 160 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 COTL1Q14019 142 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 OR51E1Q8TCB6 317 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 SLC25A4P12235 298 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PCSK6P29122 969 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PTGFRP43088 359 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 TMEM268Q5VZI3 342 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 HMGN2P46Q86SG4 172 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 KISS1RQ969F8 398 aaPredicted RBP13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PTPRFP10586 1907 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 MEIS3P1A6NDR6 274 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 YY2O15391 372 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
SEC16A-202ENST00000290037 ZIC1Q15915 447 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 ZNF761Q86XN6 746 aaPredicted RBP13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PGA4P0DJD7 388 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 PCMT1P22061 227 aa13.25□□□□□ -0.29
SEC16A-202ENST00000290037 YBX1P67809 324 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms