RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PCDHGA1Q9Y5H4 931 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 CEP192Q8TEP8 1941 aa11.64□□□□□ -0.55
SLC28A1-201ENST00000286749 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 FOXI3A8MTJ6 420 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 C9JQL5 133 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 PIAS2O75928 621 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 HEXAP06865 529 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 CD80P33681 288 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 NXPH1P58417 271 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 EIF5AP63241 154 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 SPEM2Q0P670 501 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 RBM39Q14498 530 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 SLC38A9Q8NBW4 561 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 OR6X1Q8NH79 312 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 LYZL4Q96KX0 146 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 TAAR5O14804 337 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 IFNA2P01563 188 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF43P17038 809 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 PTGDSP41222 190 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 SULT1A2P50226 295 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 SLC25A53Q5H9E4 307 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 CNTNAP3Q9BZ76 1288 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 TGIF2Q9GZN2 237 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 ELL3Q9HB65 397 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 WDR87Q6ZQQ6 2873 aa11.63□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF726A6NNF4 738 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 PRF1P14222 555 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 FAHP16930 419 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 GRB2P62993 217 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 ECH1Q13011 328 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 PEA15Q15121 130 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 BTNL8Q6UX41 500 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 ADPRHL1Q8NDY3 354 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 RNF138Q8WVD3 245 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 C1orf123Q9NWV4 160 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 PQLC2LA1A4F0 135 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 K7EPK0 472 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 CST4P01036 141 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 CD5P06127 495 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 FCGR3AP08637 254 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 FCGR2AP12318 317 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 MSX1P28360 303 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 UBE2V2Q15819 145 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 KCNMB1Q16558 191 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 TMEM268Q5VZI3 342 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 Q6ZRG5 221 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 DTX1Q86Y01 620 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 FAM71E2Q8N5Q1 922 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 DMBX1Q8NFW5 382 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 SULT4A1Q9BR01 284 aa11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 MCTS1Q9ULC4 181 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-201ENST00000286749 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 F5H5K5 113 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 OR2J2O76002 312 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 OR8U9P0C7N5 309 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 NAT2P11245 290 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 ADH6P28332 368 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 FCGR2CP31995 323 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SURF2Q15527 256 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 HIST3H3Q16695 136 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 FAM76BQ5HYJ3 339 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 RHBDD2Q6NTF9 364 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 DHRS11Q6UWP2 260 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 ETV3LQ6ZN32 361 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 C6orf201Q7Z4U5 140 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 OR8U1Q8NH10 309 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 FNDC9Q8TBE3 224 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 PIGTQ969N2 578 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SHDQ96IW2 340 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 USB1Q9BQ65 265 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF2Q9BSG1 426 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 HDHD3Q9BSH5 251 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF160Q9HCG1 818 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SEMA5BQ9P283 1151 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 PRUNE2Q8WUY3 3088 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 DHRS7CA6NNS2 312 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 COLCA2A8K830 154 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 F2RL1P55085 397 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 RAB30Q15771 203 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 NKAIN1Q4KMZ8 207 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 NSUN5P2Q63ZY6 315 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 SULF2Q8IWU5 870 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 S100A13Q99584 98 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 WDR77Q9BQA1 342 aaPredicted RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 LMAN1LQ9HAT1 526 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms