RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGLV3-1P01715 115 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 IFNA6P05013 189 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 TNFSF10P50591 281 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM178AQ8NBL3 297 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 URM1Q9BTM9 101 aaKnown RBP15.6■□□□□ 0.09
CAPN1-201ENST00000279247 IGF2RP11717 2491 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 SULT1C2O00338 296 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 EDN3P14138 238 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF24P17028 368 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 TAF9Q16594 264 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF626Q68DY1 528 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 MOB3CQ70IA8 216 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 PTPRBP23467 1997 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 IGKV1-27A0A075B6S5 117 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 A0A0A6YYH2 397 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 A6NJ64 397 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 MMP7P09237 267 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-201ENST00000279247 CEACAM1P13688 526 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 HIST1H1DP16402 221 aaKnown RBP15.59■□□□□ 0.09
CAPN1-201ENST00000279247 GSK3AP49840 483 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF81P51508 661 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 CAPZA1P52907 286 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 C6orf201Q7Z4U5 140 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 C9orf62Q8N4C0 152 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 HAS2Q92819 552 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 BORCS8Q96FH0 119 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF701Q9NV72 531 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF629Q9UEG4 869 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-201ENST00000279247 IGKV3D-15A0A087WSY6 115 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 SLC22A20A6NK97 555 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 SDCBPO00560 298 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-201ENST00000279247 NRASP01111 189 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 RAB1AP62820 205 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 CLN3Q13286 438 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 PLCXD3Q63HM9 321 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 P4HA3Q7Z4N8 544 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 PRRX2Q99811 253 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 B3GNT2Q9NY97 397 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 GTF3C1Q12789 2109 aa15.59■□□□□ 0.09
CAPN1-201ENST00000279247 CSTBP04080 98 aaKnown RBP15.58■□□□□ 0.09
CAPN1-201ENST00000279247 PRF1P14222 555 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 PI3P19957 117 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 TSPAN5P62079 268 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 SLC36A1Q7Z2H8 476 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 OR13C8Q8NGS7 320 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 OR4K15Q8NH41 348 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 HDHD3Q9BSH5 251 aaPredicted RBP15.58■□□□□ 0.09
CAPN1-201ENST00000279247 LUZP4Q9P127 313 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 SLC23A1Q9UHI7 598 aa15.58■□□□□ 0.09
CAPN1-201ENST00000279247 TPPPO94811 219 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 NGFP01138 241 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 ZNF735P0CB33 412 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 FAM3AP98173 230 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 RSU1Q15404 277 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 ATPAF1Q5TC12 328 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-201ENST00000279247 DCAF12L2Q5VW00 463 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 FTMTQ8N4E7 242 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 OR56B1Q8NGI3 324 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 CASTOR1Q8WTX7 329 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 TMEM45BQ96B21 275 aa15.58■□□□□ 0.08
CAPN1-201ENST00000279247 ZNF35P13682 527 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 AKR1C4P17516 323 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 VAMP1P23763 118 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 CDH24Q86UP0 819 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 PCNPQ8WW12 178 aaKnown RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 DYRK2Q92630 601 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 SNAPC3Q92966 411 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 WDYHV1Q96HA8 205 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 PAPOLGQ9BWT3 736 aaKnown RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 RANBP3Q9H6Z4 567 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 NPDC1Q9NQX5 325 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 FAM221AA4D161 298 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 ZNF850A8MQ14 1090 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 DISC1C4P0D8 188 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 CHRM2P08172 466 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 OR4E1P0C645 316 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 BAMBIQ13145 260 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 TSC22D1Q15714 1073 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 C6orf183Q5T699 404 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 OR8H1Q8NGG4 311 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 CCSO14618 274 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 ZNF780AO75290 641 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 ZNF205O95201 554 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 RPS27AP62979 156 aaKnown RBP15.57■□□□□ 0.08
CAPN1-201ENST00000279247 OR2W3Q7Z3T1 314 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 GPR160Q9UJ42 338 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 VSIG4Q9Y279 399 aa15.57■□□□□ 0.08
CAPN1-201ENST00000279247 CHD8Q9HCK8 2581 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 ARHGAP21Q5T5U3 1957 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 INTS1Q8N201 2190 aaKnown RBP15.56■□□□□ 0.08
CAPN1-201ENST00000279247 H2BFSP57053 126 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 NHLH1Q02575 133 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 IGFBP7Q16270 282 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 MICBQ29980 383 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 SPATA46Q5T0L3 261 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 OR56B2PQ8NGI1 322 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 SSC4DQ8WTU2 575 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 C1QTNF6Q9BXI9 259 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 CRIM1Q9NZV1 1036 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 PLEKHA6Q9Y2H5 1048 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms