RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 AQP7P3A6NL99 342 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 LRP3O75074 770 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 PTGFRP43088 359 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 PDCD1Q15116 288 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 LINC00303Q3SY05 128 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 MRGPREQ86SM8 312 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 CDC20BQ86Y33 519 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 OR13G1Q8NGZ3 307 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 ICAM5Q9UMF0 924 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 DTX4Q9Y2E6 619 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 GMDSO60547 372 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 OR2F2O95006 317 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 CA6P23280 308 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 FOXL2P58012 376 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 OR2F1Q13607 317 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 ISXQ2M1V0 245 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 ACOT7LQ6ZUV0 252 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 C9orf40Q8IXQ3 194 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF275Q9NSD4 429 aaPredicted RBP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 INTS1Q8N201 2190 aaKnown RBP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 CRYZL1O95825 349 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 GABRA4P48169 554 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 THBS3P49746 956 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 GSK3AP49840 483 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 CDC20Q12834 499 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 Q8IYB0 196 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 MFSD4AQ8N468 514 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 PTP4A1Q93096 173 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 GALMQ96C23 342 aa10.04□□□□□ -0.8
USP6NL-201ENST00000277575 TINAGL1Q9GZM7 467 aaPredicted RBP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 PARP12Q9H0J9 701 aaKnown RBP10.04□□□□□ -0.8
USP6NL-201ENST00000277575 PNLIPP16233 465 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 RTL8BQ17RB0 113 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 MESTQ5EB52 335 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 DCAF10Q5QP82 559 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 KCNRGQ8N5I3 272 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 NPEPL1Q8NDH3 523 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 SCARB1Q8WTV0 552 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 MN1Q10571 1320 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 RPS10-NUDT3A0A1W2PQS6 291 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 GALR2O43603 387 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 JTBO76095 146 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 ERGP11308 486 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 M6PRP20645 277 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 AVPR2P30518 371 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 RPS10P46783 165 aaKnown RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 ELLP55199 621 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 BTN1A1Q13410 526 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 Q6ZRG5 221 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 GLCCI1Q86VQ1 547 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 SLC25A45Q8N413 288 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 TMEM229BQ8NBD8 167 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 MRPS24Q96EL2 167 aaKnown RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 CMTM3Q96MX0 182 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 CHST6Q9GZX3 395 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 MRM2Q9UI43 246 aaKnown RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 WNT1P04628 370 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 CCL2P13500 99 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 MAGEA5P43359 124 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 FXNQ16595 210 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 COL13A1Q5TAT6 717 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 LYG2Q86SG7 212 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 OR8U1Q8NH10 309 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 UBALD1Q8TB05 177 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 ST7LQ8TDW4 575 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 SF3B5Q9BWJ5 86 aaKnown RBP10.03□□□□□ -0.8
USP6NL-201ENST00000277575 SLC17A5Q9NRA2 495 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 C19orf12Q9NSK7 152 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 F6UZH7 168 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 STARD6P59095 220 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 YIPF5Q969M3 257 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 TM4SF19Q96DZ7 209 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 SLC35E1Q96K37 410 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 OR5V1Q9UGF6 321 aa10.03□□□□□ -0.8
USP6NL-201ENST00000277575 CCDC88CQ9P219 2028 aa10.02□□□□□ -0.8
USP6NL-201ENST00000277575 TRGV10A0A0A0MS01 117 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 B4E171 279 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 YIF1AO95070 293 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 ACSM4P0C7M7 580 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 TSPAN7P41732 249 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 RPL35P42766 123 aaKnown RBP10.02□□□□□ -0.81
USP6NL-201ENST00000277575 GZMMP51124 257 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 RPS16P62249 146 aaKnown RBP10.02□□□□□ -0.81
USP6NL-201ENST00000277575 OR2W3Q7Z3T1 314 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 ASB10Q8WXI3 467 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 FN3KRPQ9HA64 309 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 TMIGD3P0DMS9 266 aaPredicted RBP10.02□□□□□ -0.81
USP6NL-201ENST00000277575 PRDX4Q13162 271 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 MICBQ29980 383 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 TMEM128Q5BJH2 165 aa10.02□□□□□ -0.81
USP6NL-201ENST00000277575 HIST2H3PS2Q5TEC6 136 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms