RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 THEGLP0DJG4 465 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 OPRM1P35372 400 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 PPP1CCP36873 323 aaKnown RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 NOVA1P51513 510 aaKnown RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF121P58317 390 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 EIF5AP63241 154 aaKnown RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ACTBL2Q562R1 376 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 OR2B11Q5JQS5 317 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 TMEM268Q5VZI3 342 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 GGNBP1Q5YKI7 109 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF343Q6P1L6 599 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF721Q8TF20 911 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ASB10Q8WXI3 467 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 PRRX2Q99811 253 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 SEBOXQ9HB31 216 aaPredicted RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 PARP11Q9NR21 331 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF581Q9P0T4 197 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 DOCK8Q8NF50 2099 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 IFNA2P01563 188 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 FOLR2P14207 255 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 MPZP25189 248 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 NHLH2Q02577 135 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KIAA0141Q14154 515 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 PLXDC2Q6UX71 529 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 Q7L0L9 218 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 OR8B12Q8NGG6 310 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KCNG3Q8TAE7 436 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 FAM213BQ8TBF2 198 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 PIGTQ969N2 578 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 TPSD1Q9BZJ3 242 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KCNJ16Q9NPI9 418 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 SUSD2Q9UGT4 822 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 CYP8B1Q9UNU6 501 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 MEMO1Q9Y316 297 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 E9PLN8 166 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 ADAM10O14672 748 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 NPIPB7O75200 414 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 JMJD7P0C870 316 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 OMGP23515 440 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 SNCAP37840 140 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 TMEM182Q6ZP80 229 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 C20orf196Q8IYI0 205 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF283Q8N7M2 679 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 DYRK2Q92630 601 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 C1orf147Q96MC9 270 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 OR10A2Q9H208 303 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 WFDC1Q9HC57 220 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 LANCL2Q9NS86 450 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 METTL1Q9UBP6 276 aaKnown RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 C2orf16Q68DN1 1984 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KIR2DS5A0A0G2JLQ3 304 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 A0A0G2JNG1 304 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 DHRS7CA6NNS2 312 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KIR2DS3K7RE56 304 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 AP4M1O00189 453 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 TNFRSF10CO14798 259 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KLK3P07288 261 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 CHRM2P08172 466 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 FBP1P09467 338 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 CD37P11049 281 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 RAB2AP61019 212 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 KIR2DS5Q14953 304 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 PCK2Q16822 640 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 C1orf53Q5VUE5 145 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 RPUSD3Q6P087 351 aaKnown RBP11.38□□□□□ -0.59
COL8A1-202ENST00000273342 DNM1P34Q6PK57 102 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 GRINAQ7Z429 371 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 MFSD8Q8NHS3 518 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 OCSTAMPQ9BR26 566 aa11.38□□□□□ -0.59
COL8A1-202ENST00000273342 MUC3AQ02505 3323 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 ALG1L2C9J202 215 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 RAMP1O60894 148 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 JTBO76095 146 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 HPNP05981 417 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 TBPP20226 339 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 CPEB2Q7Z5Q1 589 aaKnown RBP11.37□□□□□ -0.59
COL8A1-202ENST00000273342 PEG10Q86TG7 708 aaKnown RBP11.37□□□□□ -0.59
COL8A1-202ENST00000273342 TMEM156Q8N614 296 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 OR2AJ1Q8NGZ0 328 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 ABHD14AQ9BUJ0 271 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 EGLN1Q9GZT9 426 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 FAM212BQ9NTI7 297 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-202ENST00000273342 OSGIN2Q9Y236 505 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 SDK2Q58EX2 2172 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 IGKV1-9A0A0C4DH69 117 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 F5H5K5 113 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 NXPH3O95157 252 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 OR2C1O95371 312 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms