RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 LHX4Q969G2 390 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 SLC7A6OSQ96CW6 309 aaPredicted RBP8.02□□□□□ -1.13
VPS41-201ENST00000265745 TEAD3Q99594 435 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 PKP2Q99959 881 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 RTL8AQ9BWD3 113 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TEX12Q9BXU0 123 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 CHIAQ9BZP6 476 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 YIPF3Q9GZM5 350 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 FGF23Q9GZV9 251 aaPredicted RBP8.02□□□□□ -1.13
VPS41-201ENST00000265745 SLITRK2Q9H156 845 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 NIPAL2Q9H841 368 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 YY1AP1Q9H869 796 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ABCB9Q9NP78 766 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ACOXLQ9NUZ1 547 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 HAO2Q9NYQ3 351 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 DUX4Q9UBX2 424 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 ZNF391Q9UJN7 358 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 KPTNQ9Y664 436 aa8.02□□□□□ -1.13
VPS41-201ENST00000265745 TRBV23-1A0A0A0MS06 115 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 A0A1B0GUS0 222 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 ACOD1A6NK06 481 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 TMEM210A6NLX4 147 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 NDUFB3O43676 98 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 DCTDP32321 178 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 RPS7P62081 194 aaKnown RBP8.01□□□□□ -1.13
VPS41-201ENST00000265745 APOFQ13790 326 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 SNAPC1Q16533 368 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 DNAL1Q4LDG9 190 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 STUMQ69YW2 141 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 FAHD1Q6P587 224 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 DEGS2Q6QHC5 323 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 FIP1L1Q6UN15 594 aaKnown RBP8.01□□□□□ -1.13
VPS41-201ENST00000265745 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 FAM216BQ8N7L0 139 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 SCCPDHQ8NBX0 429 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 OR5T2Q8NGG2 359 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 OR8B12Q8NGG6 310 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 OR10Z1Q8NGY1 313 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 CHAC2Q8WUX2 184 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 SSMEM1Q8WWF3 244 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 HPSE2Q8WWQ2 592 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 PIGCQ92535 297 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 RPL3LQ92901 407 aaKnown RBP8.01□□□□□ -1.13
VPS41-201ENST00000265745 ITFG2Q969R8 447 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 NRBF2Q96F24 287 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 RNF170Q96K19 258 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 CLUHP3Q96NS8 147 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 RAB3IPQ96QF0 476 aaPredicted RBP8.01□□□□□ -1.13
VPS41-201ENST00000265745 WDR13Q9H1Z4 485 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 SLC25A19Q9HC21 320 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 TNFRSF19Q9NS68 423 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 TVP23BQ9NYZ1 205 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 LAMP5Q9UJQ1 280 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 POMPQ9Y244 141 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 LRP12Q9Y561 859 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 POMT1Q9Y6A1 747 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
VPS41-201ENST00000265745 A0A0U1RQK1 487 aa8□□□□□ -1.13
VPS41-201ENST00000265745 A0A0U1RQV5 110 aa8□□□□□ -1.13
VPS41-201ENST00000265745 A0A1B0GVI7 797 aa8□□□□□ -1.13
VPS41-201ENST00000265745 TMEM269A0A1B0GVZ9 245 aa8□□□□□ -1.13
VPS41-201ENST00000265745 CCDC182A6NF36 153 aa8□□□□□ -1.13
VPS41-201ENST00000265745 AKR7A2O43488 359 aa8□□□□□ -1.13
VPS41-201ENST00000265745 NDUFA7O95182 113 aa8□□□□□ -1.13
VPS41-201ENST00000265745 CRYBA1P05813 215 aa8□□□□□ -1.13
VPS41-201ENST00000265745 SELLP14151 372 aa8□□□□□ -1.13
VPS41-201ENST00000265745 DAPP51397 102 aa8□□□□□ -1.13
VPS41-201ENST00000265745 CRISP1P54107 249 aa8□□□□□ -1.13
VPS41-201ENST00000265745 RAG2P55895 527 aa8□□□□□ -1.13
VPS41-201ENST00000265745 GMFBP60983 142 aa8□□□□□ -1.13
VPS41-201ENST00000265745 ROM1Q03395 351 aa8□□□□□ -1.13
VPS41-201ENST00000265745 IKZF1Q13422 519 aa8□□□□□ -1.13
VPS41-201ENST00000265745 LRRC10Q5BKY1 277 aa8□□□□□ -1.13
VPS41-201ENST00000265745 KCTD18Q6PI47 426 aaPredicted RBP8□□□□□ -1.13
VPS41-201ENST00000265745 METAP1DQ6UB28 335 aaPredicted RBP8□□□□□ -1.13
VPS41-201ENST00000265745 ZNF788Q6ZQV5 615 aa8□□□□□ -1.13
VPS41-201ENST00000265745 KCTD8Q6ZWB6 473 aa8□□□□□ -1.13
VPS41-201ENST00000265745 VMO1Q7Z5L0 202 aa8□□□□□ -1.13
VPS41-201ENST00000265745 KRT77Q7Z794 578 aa8□□□□□ -1.13
VPS41-201ENST00000265745 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
VPS41-201ENST00000265745 ZDHHC23Q8IYP9 409 aa8□□□□□ -1.13
VPS41-201ENST00000265745 OR4F5Q8NH21 305 aa8□□□□□ -1.13
VPS41-201ENST00000265745 ANGPTL6Q8NI99 470 aa8□□□□□ -1.13
VPS41-201ENST00000265745 C8orf46Q8TAG6 207 aa8□□□□□ -1.13
VPS41-201ENST00000265745 TBC1D15Q8TC07 691 aa8□□□□□ -1.13
VPS41-201ENST00000265745 DNAJC9Q8WXX5 260 aa8□□□□□ -1.13
VPS41-201ENST00000265745 UTP4Q969X6 686 aaKnown RBP8□□□□□ -1.13
VPS41-201ENST00000265745 HIST1H2AAQ96QV6 131 aa8□□□□□ -1.13
VPS41-201ENST00000265745 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
VPS41-201ENST00000265745 MROQ9BYG7 248 aa8□□□□□ -1.13
VPS41-201ENST00000265745 DNTTIP1Q9H147 329 aa8□□□□□ -1.13
VPS41-201ENST00000265745 OR51I2Q9H344 312 aa8□□□□□ -1.13
VPS41-201ENST00000265745 PAPOLBQ9NRJ5 636 aaKnown RBP8□□□□□ -1.13
VPS41-201ENST00000265745 SNTG1Q9NSN8 517 aa8□□□□□ -1.13
VPS41-201ENST00000265745 FAM206AQ9NX38 181 aa8□□□□□ -1.13
VPS41-201ENST00000265745 C1RLQ9NZP8 487 aa8□□□□□ -1.13
VPS41-201ENST00000265745 DNAJB11Q9UBS4 358 aa8□□□□□ -1.13
VPS41-201ENST00000265745 ZNF816-ZNF321PA0A0X1KG74 233 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 PRR32B1ATL7 298 aa7.99□□□□□ -1.13
VPS41-201ENST00000265745 PSMD9O00233 223 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms