RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 AVL9Q8NBF6 648 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 GALNT14Q96FL9 552 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 TMEM59Q9BXS4 323 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 PRO1933Q9H354 126 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 FAM206AQ9NX38 181 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 SRPK3Q9UPE1 567 aa13.24□□□□□ -0.29
XRCC1-201ENST00000262887 CDC14BO60729 498 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 SCGB1D2O95969 90 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 GP1BBP13224 206 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 SUCLG1P53597 346 aaKnown RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 TMEM50BP56557 158 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 CSNK2A1P68400 391 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 FOXO1Q12778 655 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 TDGQ13569 410 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 KLHL24Q6TFL4 600 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 C19orf47Q8N9M1 422 aaKnown RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 CSNK2A3Q8NEV1 391 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 ARHGAP5-AS1Q96IT6 56 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 OR11A1Q9GZK7 315 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 C14orf166Q9Y224 244 aaKnown RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 A8MVM7 634 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 MASP2O00187 686 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 PLPP3O14495 311 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 C1QL1O75973 258 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 F10P00742 488 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 NR2C1P13056 603 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 ZNF20P17024 532 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 FCARP24071 287 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 PTGER4P35408 488 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 SLC26A5P58743 744 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 RSU1Q15404 277 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-201ENST00000262887 DNM1P34Q6PK57 102 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 KCNG3Q8TAE7 436 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 PBOV1Q9GZY1 135 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 METTL9Q9H1A3 318 aa13.23□□□□□ -0.29
XRCC1-201ENST00000262887 A0A1W2PP11 408 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 IGHMP01871 453 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 MBP02144 154 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 OR3A4PP47883 348 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 ZNF84P51523 738 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 PCK2Q16822 640 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 BSCL2Q96G97 398 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-201ENST00000262887 TCTN2Q96GX1 697 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 GAL3ST4Q96RP7 486 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 BCO1Q9HAY6 547 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 TMED3Q9Y3Q3 217 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 FRYLO94915 3013 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 TMED7-TICAM2A0A0A6YYA0 188 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 BLACEA4D250 179 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 FAM221BA6H8Z2 402 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 IFNA21P01568 189 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 PGCP20142 388 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 RAB4AP20338 218 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 SNU13P55769 128 aaKnown RBP13.22□□□□□ -0.29
XRCC1-201ENST00000262887 SLC37A1P57057 533 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 TAS2R46P59540 309 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 ZNF248Q8NDW4 579 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-201ENST00000262887 SUSD2Q9UGT4 822 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 ARID1AO14497 2285 aa13.22□□□□□ -0.29
XRCC1-201ENST00000262887 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-201ENST00000262887 A0A1B0GV50 99 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 ZNF727A8MUV8 499 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 RAMP1O60894 148 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 CRTAPO75718 401 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-201ENST00000262887 LMO1P25800 156 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
XRCC1-201ENST00000262887 FOXK1P85037 733 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 TANGO2Q6ICL3 276 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 COMMD2Q86X83 199 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 LFNGQ8NES3 379 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 NTNG2Q96CW9 530 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 BMFQ96LC9 184 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 SUCNR1Q9BXA5 334 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 OR8D2Q9GZM6 311 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.29
XRCC1-201ENST00000262887 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 CPAMD8Q8IZJ3 1885 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 A0A1B0GW64 132 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 CDC14CA4D256 554 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 ZNF587BE7ETH6 402 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 PPP1R2P9O14990 202 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms