RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ZNF708P17019 499 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 C4orf17Q53FE4 359 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 AADACL3Q5VUY0 350 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 FAM71E2Q8N5Q1 922 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 OR5D14Q8NGL3 314 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 OR5B2Q96R09 309 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 SLC5A7Q9GZV3 580 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 KLRF1Q9NZS2 232 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 MCTS1Q9ULC4 181 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 SPTY2D1-AS1A0A0U1RR47 76 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 C1orf196B1AJZ1 125 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 TSPAN15O95858 294 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 HIST1H1DP16402 221 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 CAV2P51636 162 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 HSD17B7P56937 341 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 RAB5BP61020 215 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 CHRFAM7AQ494W8 412 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 PLXDC2Q6UX71 529 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 OR5AS1Q8N127 324 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 GPR132Q9UNW8 380 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 KLF2Q9Y5W3 355 aaPredicted RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 DNAJC13O75165 2243 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 A0A1W2PR80 420 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 SFT2D2O95562 160 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 HPNP05981 417 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 TMEM225BP0DP42 221 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 HKR1P10072 659 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 POLR2HP52434 150 aaKnown RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 QRFPP83859 136 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 EMC4Q5J8M3 183 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 TMEM244Q5VVB8 128 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 TMEM182Q6ZP80 229 aaPredicted RBP11.44□□□□□ -0.58
SNX1-201ENST00000261889 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 FAAP24Q9BTP7 215 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 RGCCQ9H4X1 137 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 LHFPL6Q9Y693 200 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 R4GN57 208 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 OR5H15A6NDH6 313 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 CLN5O75503 358 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 ONECUT2O95948 504 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 CLRN1P58418 232 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNX1-201ENST00000261889 OGFOD3Q6PK18 319 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 LYZL2Q7Z4W2 148 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 GKN2Q86XP6 184 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 TMEM217Q8N7C4 229 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 OR1L3Q8NH93 324 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 SEC11CQ9BY50 192 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 EML6Q6ZMW3 1958 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 ZDBF2Q9HCK1 2354 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 FAM230AA0A1W2PPH8 454 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 PHYHO14832 338 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 DXOO77932 396 aaKnown RBP11.43□□□□□ -0.58
SNX1-201ENST00000261889 CSTBP04080 98 aaKnown RBP11.43□□□□□ -0.58
SNX1-201ENST00000261889 FCGR2AP12318 317 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 ZNF17P17021 662 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 PTAFRP25105 342 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 CRABP1P29762 137 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 LPCAT3Q6P1A2 487 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 FAM213BQ8TBF2 198 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 ASB10Q8WXI3 467 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 FAM131CQ96AQ9 280 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 GABRG3Q99928 467 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 SLC26A1Q9H2B4 701 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 WFDC1Q9HC57 220 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 PRR14LQ5THK1 2151 aa11.43□□□□□ -0.58
SNX1-201ENST00000261889 GPR179Q6PRD1 2367 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 ACKR3P25106 362 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 LAP3P28838 519 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 CAPZBP47756 277 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CCL20P78556 96 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 HGFACQ04756 655 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 HAGHQ16775 308 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CLEC12BQ2HXU8 276 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 PRSS54Q6PEW0 395 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 ADAMTS17Q8TE56 1095 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 KLHDC7BQ96G42 594 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 SLC46A1Q96NT5 459 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 AKIRIN1Q9H9L7 192 aaPredicted RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 DBX1A6NMT0 343 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 F8VVB4 439 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 F8VWA3 439 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 GABRA4P48169 554 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CX3CR1P49238 355 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 PCK2Q16822 640 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 GPR173Q9NS66 373 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CACNA1GO43497 2377 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 FREM1Q5H8C1 2179 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 H7C1Q1 480 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms