RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 APCDD1LQ8NCL9 501 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 KCNG3Q8TAE7 436 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 TCTEX1D2Q8WW35 142 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 TWSG1Q9GZX9 223 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 LANCL2Q9NS86 450 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 MEMO1Q9Y316 297 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 RPS2P15880 293 aaKnown RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 S100PP25815 95 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 ZNF121P58317 390 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 LANCL3Q6ZV70 420 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 OR8B12Q8NGG6 310 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 SLAMF9Q96A28 289 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 PFDN5Q99471 154 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 PRRX2Q99811 253 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 GABRG3Q99928 467 aa14.03□□□□□ -0.16
LMNB1-201ENST00000261366 ZNF2Q9BSG1 426 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 SEBOXQ9HB31 216 aaPredicted RBP14.03□□□□□ -0.16
LMNB1-201ENST00000261366 ALG1L2C9J202 215 aa14.02□□□□□ -0.16
LMNB1-201ENST00000261366 ATXN7O15265 892 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-201ENST00000261366 IFNA2P01563 188 aa14.02□□□□□ -0.16
LMNB1-201ENST00000261366 CHRM2P08172 466 aa14.02□□□□□ -0.16
LMNB1-201ENST00000261366 HOXC4P09017 264 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-201ENST00000261366 VAX1Q5SQQ9 334 aa14.02□□□□□ -0.16
LMNB1-201ENST00000261366 C6orf201Q7Z4U5 140 aa14.02□□□□□ -0.16
LMNB1-201ENST00000261366 C1orf147Q96MC9 270 aaPredicted RBP14.02□□□□□ -0.16
LMNB1-201ENST00000261366 ZNF727A8MUV8 499 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 GPR37O15354 613 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 EIF2S3P41091 472 aaKnown RBP14.02□□□□□ -0.17
LMNB1-201ENST00000261366 FXYD4P59646 89 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 GGNBP1Q5YKI7 109 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 WDSUB1Q8N9V3 476 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 KCNK17Q96T54 332 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 RARRES2Q99969 163 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 PAPOLGQ9BWT3 736 aaKnown RBP14.02□□□□□ -0.17
LMNB1-201ENST00000261366 OR10A2Q9H208 303 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 METTL1Q9UBP6 276 aaKnown RBP14.02□□□□□ -0.17
LMNB1-201ENST00000261366 DNAJB11Q9UBS4 358 aa14.02□□□□□ -0.17
LMNB1-201ENST00000261366 FAM221BA6H8Z2 402 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 STMND1H3BQB6 276 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 IGHV2-70P01814 119 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 GSTP1P09211 210 aaKnown RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 PPP1CCP36873 323 aaKnown RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 SNCAP37840 140 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 HAAOP46952 286 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 BRICD5Q6PL45 260 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 PEG10Q86TG7 708 aaKnown RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 ZNF283Q8N7M2 679 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 EGLN1Q9GZT9 426 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 SUSD2Q9UGT4 822 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 SRPK3Q9UPE1 567 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OSGIN2Q9Y236 505 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 JTBO76095 146 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 SEMA4FO95754 770 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 IGKV3-11P04433 115 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 HPNP05981 417 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 LYL1P12980 280 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 RRADP55042 308 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 NDUFA6P56556 154 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 CHAF1BQ13112 559 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 PCK2Q16822 640 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OR2B11Q5JQS5 317 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 SULF2Q8IWU5 870 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OR56B1Q8NGI3 324 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 FAM213BQ8TBF2 198 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 PIGTQ969N2 578 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 TCTN2Q96GX1 697 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OCSTAMPQ9BR26 566 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 WWTR1Q9GZV5 400 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 FAM212BQ9NTI7 297 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 CCDC163A0A0D9SF12 145 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 FAM221AA4D161 298 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 DHRS7CA6NNS2 312 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 E9PLN8 166 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 AP4M1O00189 453 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OPRM1P35372 400 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 PLXDC2Q6UX71 529 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 TMEM182Q6ZP80 229 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 H1FNTQ75WM6 255 aaPredicted RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 OR2AJ1Q8NGZ0 328 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 URM1Q9BTM9 101 aaKnown RBP14.01□□□□□ -0.17
LMNB1-201ENST00000261366 GGACTQ9BVM4 153 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 WFDC1Q9HC57 220 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 C1orf123Q9NWV4 160 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 CYP8B1Q9UNU6 501 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 B3GALT1Q9Y5Z6 326 aa14.01□□□□□ -0.17
LMNB1-201ENST00000261366 FTCDNL1E5RQL4 147 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 TAAR5O14804 337 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 TSPAN2O60636 221 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 NOVA1P51513 510 aaKnown RBP14□□□□□ -0.17
LMNB1-201ENST00000261366 NHLH2Q02577 135 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 IL15RAQ13261 267 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 KIAA0141Q14154 515 aaPredicted RBP14□□□□□ -0.17
LMNB1-201ENST00000261366 FZD2Q14332 565 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 TSC22D1Q15714 1073 aa14□□□□□ -0.17
LMNB1-201ENST00000261366 ACTBL2Q562R1 376 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms