RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TACC2O95359 2948 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 HECTD1Q9ULT8 2610 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 ALX3O95076 343 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 ADH4P08319 380 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 ADRA2CP18825 462 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 PPOXP50336 477 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 GPM6AP51674 278 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 MAB21L1Q13394 359 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 CNN3Q15417 329 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 SPRNQ5BIV9 151 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 OR52N4Q8NGI2 321 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 OR5A2Q8NGI9 324 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 PPP1R14BQ96C90 147 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 RNF170Q96K19 258 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 TECTBQ96PL2 329 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 SPACA5Q96QH8 159 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 HIST1H2AAQ96QV6 131 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 CACNG6Q9BXT2 260 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 ABCB9Q9NP78 766 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 TMEM138Q9NPI0 162 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 SNTG1Q9NSN8 517 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 NOP16Q9Y3C1 178 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 DSCAMO60469 2012 aa13.42□□□□□ -0.26
CCDC90B-201ENST00000260054 NBPF19A0A087WUL8 3843 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 IGKV1-27A0A075B6S5 117 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 IGHV3-64DA0A0J9YX35 117 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 LOC100289279A0A1B0GTE1 492 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 FAM230AA0A1W2PPH8 454 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 PQLC2LA1A4F0 135 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 MYL9P24844 172 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 BDKRB2P30411 391 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 TMBIM6P55061 237 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 CRIP3Q6Q6R5 217 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 RAB2BQ8WUD1 216 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 SPSB1Q96BD6 273 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 ISOC1Q96CN7 298 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 GFI1Q99684 422 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 NKX3-1Q99801 234 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 RTL8AQ9BWD3 113 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 SLC7A11Q9UPY5 501 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 SPG11Q96JI7 2443 aa13.41□□□□□ -0.26
CCDC90B-201ENST00000260054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ZNF732B4DXR9 585 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 OCMP0CE72 109 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 PRKACBP22694 351 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 SDC2P34741 201 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 FUT6P51993 359 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CCL8P80075 99 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 TNFAIP6P98066 277 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 SPERTQ8NA61 448 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 BORCS8Q96FH0 119 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 OR2V2Q96R30 315 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 DIRC2Q96SL1 478 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 VRK1Q99986 396 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 MICU1Q9BPX6 476 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 SLITRK2Q9H156 845 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CXXC4Q9H2H0 198 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 PMF1-BGLAPU3KQ54 211 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 OR5B21A6NL26 309 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 OVOL3O00110 214 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 NCR1O76036 304 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ALDOBP05062 364 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CD55P08174 381 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 HCKP08631 526 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 BMP4P12644 408 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CDKN1AP38936 164 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CD200P41217 278 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 MTNR1BP49286 362 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 GNG3P63215 75 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ZNF154Q13106 437 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 FAM76BQ5HYJ3 339 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 FAM209AQ5JX71 171 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 DDI2Q5TDH0 399 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 PRAMEF6Q5VXH4 476 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 NR2C2APQ86WQ0 139 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ZNF420Q8TAQ5 688 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ITLN1Q8WWA0 313 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 MEGF10Q96KG7 1140 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 CCL19Q99731 98 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 IL19Q9UHD0 177 aa13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 FBXO9Q9UK97 447 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 AK6Q9Y3D8 172 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-201ENST00000260054 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 USF3Q68DE3 2245 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 SMIM30A4D0T7 59 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 H3BMQ9 156 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 H7C417 338 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 CLEC2LP0C7M8 214 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 TNFSF4P23510 183 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 RBP2P50120 134 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 OR10A3P58181 314 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 MXD1Q05195 221 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 KISS1Q15726 138 aa13.39□□□□□ -0.27
CCDC90B-201ENST00000260054 MPPED2Q15777 294 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms