RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 PMP22Q01453 160 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 DGAT2L6Q6ZPD8 337 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.26□□□□□ -0.29
KCTD3-201ENST00000259154 KISS1RQ969F8 398 aaPredicted RBP13.26□□□□□ -0.29
KCTD3-201ENST00000259154 DEFB126Q9BYW3 111 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 GCM1Q9NP62 436 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 CTDSPLO15194 276 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 IAPPP10997 89 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 MYF5P13349 255 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 KLK2P20151 261 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 RIPPLY1Q0D2K3 151 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 RSPO4Q2I0M5 234 aaPredicted RBP13.26□□□□□ -0.29
KCTD3-201ENST00000259154 PHF19Q5T6S3 580 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF600Q6ZNG1 722 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 OR56B2PQ8NGI1 322 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 OR2I1PQ8NGU4 316 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 LIN37Q96GY3 246 aaPredicted RBP13.26□□□□□ -0.29
KCTD3-201ENST00000259154 FOXQ1Q9C009 403 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 VN1R1Q9GZP7 353 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 ANKRD10Q9NXR5 420 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 CHRNA9Q9UGM1 479 aa13.26□□□□□ -0.29
KCTD3-201ENST00000259154 WDFY4Q6ZS81 3184 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 TRAV34A0A0B4J273 112 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 E9PQ18 207 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 BPNT1O95861 308 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PNPP00491 289 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 NKX2-1P43699 371 aaPredicted RBP13.25□□□□□ -0.29
KCTD3-201ENST00000259154 RABIFP47224 123 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 DAP3P51398 398 aaKnown RBP13.25□□□□□ -0.29
KCTD3-201ENST00000259154 GGNBP1Q5YKI7 109 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 LRFN5Q96NI6 719 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 SERTAD3Q9UJW9 196 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 DUS4LO95620 317 aaKnown RBP13.25□□□□□ -0.29
KCTD3-201ENST00000259154 MESTQ5EB52 335 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PABPC1L2AQ5JQF8 200 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 DHRS11Q6UWP2 260 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 MOB3CQ70IA8 216 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF429Q86V71 674 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 MCEMP1Q8IX19 187 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 CA13Q8N1Q1 262 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF681Q96N22 645 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 TMEM74BQ9NUR3 256 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 A6NIZ1 184 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 RAP1BP61224 184 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PSG6Q00889 435 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF880Q6PDB4 577 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 OPN5Q6U736 354 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 IL34Q6ZMJ4 242 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 SEC11CQ9BY50 192 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 FAM60AQ9NP50 221 aa13.25□□□□□ -0.29
KCTD3-201ENST00000259154 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
KCTD3-201ENST00000259154 OR2M5A3KFT3 312 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 RER1O15258 196 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 MPGP29372 298 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 HMGN3Q15651 99 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 PCK2Q16822 640 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 NKAIN1Q4KMZ8 207 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 TIPARPQ7Z3E1 657 aaKnown RBP13.24□□□□□ -0.29
KCTD3-201ENST00000259154 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 APOBEC4Q8WW27 367 aaKnown RBP13.24□□□□□ -0.29
KCTD3-201ENST00000259154 LCORQ96JN0 433 aaPredicted RBP13.24□□□□□ -0.29
KCTD3-201ENST00000259154 EDEM2Q9BV94 578 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 IGHV3-15A0A0B4J1V0 119 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 PPP5D1E7EU14 171 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 OR2A4O95047 310 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 HEXAP06865 529 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 GABREP78334 506 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 ZXDAP98168 799 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 MLC1Q15049 377 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 MPPED2Q15777 294 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 DRAM2Q6UX65 266 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 OR2A7Q96R45 310 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 HDHD3Q9BSH5 251 aaPredicted RBP13.24□□□□□ -0.29
KCTD3-201ENST00000259154 FAM103A1Q9BTL3 118 aaKnown RBP13.24□□□□□ -0.29
KCTD3-201ENST00000259154 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 WSB1Q9Y6I7 421 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 OR6C6A6NF89 314 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 CD300LBA8K4G0 201 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 DVL1O14640 695 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 TCAPO15273 167 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 CASP6P55212 293 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 TMEM41BQ5BJD5 291 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 CDCP2Q5VXM1 449 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 CCDC71LQ8N9Z2 235 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 GDF15Q99988 308 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
KCTD3-201ENST00000259154 FBP1P09467 338 aa13.23□□□□□ -0.29
KCTD3-201ENST00000259154 DRD3P35462 400 aa13.23□□□□□ -0.29
KCTD3-201ENST00000259154 PNLIPRP2P54317 469 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms