RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 DHRS3O75911 302 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CYC1P08574 325 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CCL3P10147 92 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 NR2C1P13056 603 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 THBS4P35443 961 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 OR3A2P47893 321 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 SNU13P55769 128 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CSNK2A1P68400 391 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 ZSCAN4Q8NAM6 433 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CSNK2A3Q8NEV1 391 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 NABP1Q96AH0 204 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 WDR54Q9H977 334 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 PURGQ9UJV8 347 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 V9GYS6 101 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CNTRLQ7Z7A1 2325 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 IGHV1-45A0A0A0MS14 117 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 F8VVB4 439 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 F8VWA3 439 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 HPNP05981 417 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 NAT2P11245 290 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 FCGR2AP12318 317 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 CCL4P13236 92 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 RSPO1Q2MKA7 263 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-202ENST00000244303 BHLHE23Q8NDY6 225 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 STOML3Q8TAV4 291 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 CDC6Q99741 560 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 RBM24Q9BX46 236 aaKnown RBP12.61□□□□□ -0.39
HIF3A-202ENST00000244303 PECRQ9BY49 303 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 RAB18Q9NP72 206 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.39
HIF3A-202ENST00000244303 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 EHFQ9NZC4 300 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
HIF3A-202ENST00000244303 OSGIN2Q9Y236 505 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 SDK2Q58EX2 2172 aa12.61□□□□□ -0.39
HIF3A-202ENST00000244303 A0A087WZY1 265 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 LOC102723996A0A087X1L8 192 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 NPIPA2E9PIF3 369 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 NPIPA3F8WFD2 350 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 ATG12O94817 140 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 CD63P08962 238 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 DBHP09172 617 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 GLRA1P23415 457 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 RPL35P42766 123 aaKnown RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 ALDH3B1P43353 468 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 TRIM61Q5EBN2 209 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 MR1Q95460 341 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 PIGTQ969N2 578 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 JSRP1Q96MG2 331 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 SCGB3A2Q96PL1 93 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 GHRLQ9UBU3 117 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 PIGLQ9Y2B2 252 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 CER1O95813 267 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 KLK3P07288 261 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 UMODP07911 640 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 AKR1C2P52895 323 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 TAS2R46P59540 309 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 AKR1C1Q04828 323 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 ZFP36L1Q07352 338 aaKnown RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 EIF3IQ13347 325 aaKnown RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 TMEM88Q6PEY1 159 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 OPN5Q6U736 354 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 FOXL2NBQ6ZUU3 175 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 FAM219AQ8IW50 185 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 TMEM123Q8N131 208 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 ELL3Q9HB65 397 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-202ENST00000244303 PROK2Q9HC23 129 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
HIF3A-202ENST00000244303 MSGN1A6NI15 193 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 FGF16O43320 207 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 DHHO43323 396 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 LIFP15018 202 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 TRA2AQ13595 282 aaKnown RBP eCLIP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 OR9K2Q8NGE7 335 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 OR10C1Q96KK4 312 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 S100A13Q99584 98 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 ANGPTL4Q9BY76 406 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 METTL8Q9H825 291 aaKnown RBP12.59□□□□□ -0.39
HIF3A-202ENST00000244303 CYTL1Q9NRR1 136 aa12.59□□□□□ -0.39
HIF3A-202ENST00000244303 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms