RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 AVPR2P30518 371 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 CNN1P51911 297 aaKnown RBP12.14□□□□□ -0.47
SF3A1-201ENST00000215793 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 LRRC10Q5BKY1 277 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ZBTB37Q5TC79 503 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 SLC16A12Q6ZSM3 486 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 C20orf141Q9NUB4 165 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 TTC3P53804 2025 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 NDUFB3O43676 98 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 HIST1H1DP16402 221 aaKnown RBP12.14□□□□□ -0.47
SF3A1-201ENST00000215793 DGAT2L6Q6ZPD8 337 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 BHLHA9Q7RTU4 235 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ZNRF4Q8WWF5 429 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 NTNG2Q96CW9 530 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ALG14Q96F25 216 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 SERGEFQ9UGK8 458 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 CYB5R1Q9UHQ9 305 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 BTAF1O14981 1849 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 NRAPQ86VF7 1730 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ACSM4P0C7M7 580 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 KCNJ3P48549 501 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 GLCCI1Q86VQ1 547 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 ADAT1Q9BUB4 502 aaKnown RBP12.14□□□□□ -0.47
SF3A1-201ENST00000215793 EXOGQ9Y2C4 368 aaKnown RBP12.14□□□□□ -0.47
SF3A1-201ENST00000215793 H3BP45 60 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 CST4P01036 141 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 HYAL1Q12794 435 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 DOK1Q99704 481 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 U3KQ87 197 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 CST7O76096 145 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 HOXC8P31273 242 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF816Q0VGE8 651 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-201ENST00000215793 OR1L3Q8NH93 324 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 OR2T6Q8NHC8 308 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZFP64Q9NPA5 681 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
SF3A1-201ENST00000215793 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 HRASP01112 189 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 MYF5P13349 255 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 PTGFRP43088 359 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 CRYBB2P43320 205 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF707Q96C28 371 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-201ENST00000215793 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 TMPRSS5Q9H3S3 457 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 OR5H15A6NDH6 313 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 MICBQ29980 383 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 IGHV5-51A0A0C4DH38 117 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 PRSS44E7EML9 344 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF141Q15928 474 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 RNF212Q495C1 297 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 CLLU1Q5K131 121 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 GFRALQ6UXV0 394 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF683Q8IZ20 524 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF764Q96H86 408 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-201ENST00000215793 GNRHR2Q96P88 292 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 TIMM9Q9Y5J7 89 aa12.13□□□□□ -0.47
SF3A1-201ENST00000215793 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 M0R1X1 148 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 SLC31A2O15432 143 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 KRASP01116 189 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 NGFP01138 241 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 FMODQ06828 376 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ACER2Q5QJU3 275 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 OR13G1Q8NGZ3 307 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 TAAR3PQ9P1P4 343 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF17P17021 662 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 PIK3IP1Q96FE7 263 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 UQCC1Q9NVA1 299 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 RASL12Q9NYN1 266 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 MTCH2Q9Y6C9 303 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF320A2RRD8 509 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 RER1O15258 196 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 IGHA2P01877 340 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF766Q5HY98 468 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 GUSBP11Q6P575 273 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 TRAT1Q6PIZ9 186 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 ARHGAP5-AS1Q96IT6 56 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms