RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ST3GAL2Q16842 350 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 AWAT2Q6E213 333 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 DNM1P46Q6ZS02 220 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ANGPTL5Q86XS5 388 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SLA2Q9H6Q3 261 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CADP27708 2225 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ESPL1Q14674 2120 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ANKRD20A5PA0PJZ0 165 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GGT3PA6NGU5 568 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 BPNT1O95861 308 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ECDO95905 644 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CELA3BP08861 270 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HOXD4P09016 255 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 WNT5AP41221 380 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR3A4PP47883 348 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 UNC119Q13432 240 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 UNQ6494/PRO21346Q6UXR6 183 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 BEST4Q8NFU0 473 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR56B4Q8NH76 319 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GIMAP1Q8WWP7 306 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PTX4Q96A99 478 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 C1orf147Q96MC9 270 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 REPIN1Q9BWE0 567 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 C20orf85Q9H1P6 137 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ADGRG4Q8IZF6 3080 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PRRG2O14669 202 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 FABP7O15540 132 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CXCL3P19876 107 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CEACAM8P31997 349 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 MRPS10P82664 201 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 QRFPP83859 136 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TMEM42Q69YG0 159 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CXorf67Q86X51 503 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 DOLPP1Q86YN1 238 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GPER1Q99527 375 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ATG5Q9H1Y0 275 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GPR173Q9NS66 373 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 FLVCR2Q9UPI3 526 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 RELNP78509 3460 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 VSIG8P0DPA2 414 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HOXB1P14653 301 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 P2RY6Q15077 328 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CD276Q5ZPR3 534 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GFRALQ6UXV0 394 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PIGTQ969N2 578 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 DIABLOQ9NR28 239 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 MRPS28Q9Y2Q9 187 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 STARD10Q9Y365 291 aa17■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SHANK1Q9Y566 2161 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 AKR7A2O43488 359 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 IDH3GP51553 393 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PMPCAQ10713 525 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 BEND4Q6ZU67 534 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR5D18Q8NGL1 313 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PHF21AQ96BD5 680 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GAL3ST1Q99999 423 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ACTR6Q9GZN1 396 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 BEX1Q9HBH7 125 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 NKIRAS2Q9NYR9 191 aa16.99■□□□□ 0.31
TNFRSF1A-201ENST00000162749 KALRNO60229 2985 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TPPPO94811 219 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HPXP02790 462 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GLI4P10075 376 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 RAB6AP20340 208 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PSMB1P20618 241 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HOXC12P31275 282 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 AP3S2P59780 193 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 MALLQ13021 153 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HLXQ14774 488 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CLVS2Q5SYC1 327 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OLFML2AQ68BL7 652 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 FAAP20Q6NZ36 180 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GLIPR1L1Q6UWM5 242 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 WDR31Q8NA23 367 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZCCHC14Q8WYQ9 949 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 FAM46BQ96A09 425 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TINAGQ9UJW2 476 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 NAP1L6A6NFF2 107 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TBC1D28Q2M2D7 210 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 RFPL4BQ6ZWI9 263 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PNLDC1Q8NA58 520 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SPSB1Q96BD6 273 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SFXN3Q9BWM7 321 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 FBLN5Q9UBX5 448 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ACACBO00763 2458 aa16.98■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZNF816-ZNF321PA0A0X1KG74 233 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TMEM14DPA8MWL7 114 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 NRASP01111 189 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 IGKV3-15P01624 115 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SNRPD2P62316 118 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZNF474Q6S9Z5 364 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 C17orf78Q8N4C9 275 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR56B2PQ8NGI1 322 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 C15orf40Q8WUR7 153 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GON7Q9BXV9 100 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 POFUT1Q9H488 388 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZNF222Q9UK12 451 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 RAB22AQ9UL26 194 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZNF835Q9Y2P0 537 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 COL6A6A6NMZ7 2263 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms