RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 ALX4Q9H161 411 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 KCNK7Q9Y2U2 307 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 ARHGAP21Q5T5U3 1957 aa12.39□□□□□ -0.43
RTFDC1-201ENST00000023939 IGKV1-27A0A075B6S5 117 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 CST4P01036 141 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 HPXP02790 462 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 CPT2P23786 658 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 ERP29P30040 261 aaKnown RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 CBX5P45973 191 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 PPA1Q15181 289 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 ACSF3Q4G176 576 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 RTL6Q6ICC9 239 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 Q6ZT83 130 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC36A1Q7Z2H8 476 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 PXT1Q8NFP0 134 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 OR11H7Q8NGC8 314 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 OR6K3Q8NGY3 331 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 OR8S1Q8NH09 359 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 DVL3Q92997 716 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 POM121Q96HA1 1249 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 METTL9Q9H1A3 318 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 GPN1Q9HCN4 374 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 MYOZ1Q9NP98 299 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
RTFDC1-201ENST00000023939 PYCARD-AS1I3L0S3 204 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 TMEM225BP0DP42 221 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 APLNRP35414 380 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 RAD52P43351 418 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 GZMKP49863 264 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ATP1B3P54709 279 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 GNG2P59768 71 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 GK2Q14410 553 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 SF3B4Q15427 424 aaKnown RBP eCLIP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 DMRTC1Q5HYR2 192 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 NSUN5P2Q63ZY6 315 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 CSNK2A3Q8NEV1 391 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 OR51T1Q8NGJ9 327 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 NUDCD2Q8WVJ2 157 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 MRPS24Q96EL2 167 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 Q96M66 194 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 SCP2D1Q9UJQ7 156 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 TNRC6AQ8NDV7 1962 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 FAM230AA0A1W2PPH8 454 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 SERPINE3A8MV23 424 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 DISC1C4P0D8 188 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 AKR7A2O43488 359 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ANXA3P12429 323 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 RNASE10Q5GAN6 216 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF626Q68DY1 528 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 MRPL21Q7Z2W9 205 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 MDP1Q86V88 176 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 C9orf106Q8NAJ2 232 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ZSCAN4Q8NAM6 433 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ST8SIA4Q92187 359 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 PRRT1Q99946 306 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 IFT46Q9NQC8 304 aa12.37□□□□□ -0.43
RTFDC1-201ENST00000023939 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 M0QYG6 137 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PDGFAP04085 211 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 AMY2AP04746 511 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 ANXA7P20073 488 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 COX5AP20674 150 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 SERPINA2P20848 420 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 MOB3CQ70IA8 216 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 BPIFB2Q8N4F0 458 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 RBMXL3Q8N7X1 1067 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 OR56B2PQ8NGI1 322 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PIGCQ92535 297 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 WBP1Q96G27 269 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PCDHB16Q9NRJ7 776 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PTTG3PQ9NZH4 202 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
RTFDC1-201ENST00000023939 FREM2Q5SZK8 3169 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 SSNA1O43805 119 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 CREBL2O60519 120 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 RAD51DO75771 328 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 VSIG10L2P0DP72 767 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 CCL2P13500 99 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF14P17017 642 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms