RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 HKR1P10072 659 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 SLC9A3R2Q15599 337 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 METTL11BQ5VVY1 283 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 RUSC1-AS1Q66K80 236 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 KCTD18Q6PI47 426 aaPredicted RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 BTN2A1Q7KYR7 527 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 BCDIN3DQ7Z5W3 292 aaKnown RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 COMMD2Q86X83 199 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 HPSE2Q8WWQ2 592 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 OR5P3Q8WZ94 311 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 RPL3LQ92901 407 aaKnown RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 CNN2Q99439 309 aaKnown RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 TEAD3Q99594 435 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 CCL13Q99616 98 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 MROQ9BYG7 248 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 PRRG3Q9BZD7 231 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 FGF23Q9GZV9 251 aaPredicted RBP11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 ABCB9Q9NP78 766 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 FAM206AQ9NX38 181 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 ZNF391Q9UJN7 358 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 COPS3Q9UNS2 423 aa11.93□□□□□ -0.5
HNRNPU-229ENST00000640440 TMEM269A0A1B0GVZ9 245 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 TMEM210A6NLX4 147 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 SRRM5B3KS81 715 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 CLDN34H7C241 214 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 P2RY10O00398 339 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 LIPFP07098 398 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 MMP9P14780 707 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 EPHA2P29317 976 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 ESRRGP62508 458 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 C1orf146Q5VVC0 180 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 ZDHHC23Q8IYP9 409 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 FAM216BQ8N7L0 139 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 RNF170Q96K19 258 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 OR8B4Q96RC9 309 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 SNTG1Q9NSN8 517 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 DNAJB11Q9UBS4 358 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 IKZF2Q9UKS7 526 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 PKD1L1Q8TDX9 2849 aa11.92□□□□□ -0.5
HNRNPU-229ENST00000640440 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 ZNF816-ZNF321PA0A0X1KG74 233 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 G3V2T6 193 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 ECDO95905 644 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 FASP25445 335 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 GPM6AP51674 278 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 MFGE8Q08431 387 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 FOXL1Q12952 345 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 IKZF1Q13422 519 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 ZNF829Q3KNS6 432 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 DEGS2Q6QHC5 323 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 MEPCEQ7L2J0 689 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 SLC36A1Q7Z2H8 476 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 AMIGO2Q86SJ2 522 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 TCEANCQ8N8B7 351 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 OR5T2Q8NGG2 359 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 C12orf43Q96C57 262 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 FAM71F1Q96KD3 344 aaPredicted RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 PBOV1Q9GZY1 135 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 GABARAPL1Q9H0R8 117 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 SIRPDQ9H106 197 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 GPR84Q9NQS5 396 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 RPUSD1Q9UJJ7 312 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 PCDHGB1Q9Y5G3 927 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 TMEM14AQ9Y6G1 99 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 DSCAML1Q8TD84 2053 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
HNRNPU-229ENST00000640440 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 ACOD1A6NK06 481 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 ZAR1LA6NP61 321 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 AKR7A2O43488 359 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 ZNF254O75437 659 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 SELLP14151 372 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 MAP2K3P46734 347 aa11.9□□□□□ -0.5
HNRNPU-229ENST00000640440 RIDAP52758 137 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms