RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-216ENST00000639300 GREB1Q4ZG55 1949 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 OR6C6A6NF89 314 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 DCTN6O00399 190 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 SNCAP37840 140 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 SSBP1Q04837 148 aaKnown RBP12.85□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM182Q6ZP80 229 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-216ENST00000639300 OSR2Q8N2R0 312 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 CLEC1BQ9P126 229 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 JTBO76095 146 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF32P17041 273 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 PTGFRP43088 359 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 DEFB108BQ8NET1 73 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-216ENST00000639300 SCN4AP35499 1836 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 OR2M5A3KFT3 312 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 SPINK2P20155 84 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 OR3A4PP47883 348 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 AANATQ16613 207 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 ZBTB44Q8NCP5 570 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 KCNE4Q8WWG9 221 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 GHRLQ9UBU3 117 aa12.85□□□□□ -0.35
SCARB2-216ENST00000639300 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 H3BP45 60 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 TPPPO94811 219 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 MT-CO2P00403 227 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 GLRA1P23415 457 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 NFYBP25208 207 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 TLE4Q04727 773 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 ACER2Q5QJU3 275 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 CDC20BQ86Y33 519 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 INTS12Q96CB8 462 aaKnown RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 TMPRSS13Q9BYE2 586 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 TCRBV16S1A1N1A0A5B0 115 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 MEX3AA1L020 520 aaKnown RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 RFPL4AA6NLU0 287 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 RFPL4AL1F8VTS6 287 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 MPPED1O15442 326 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 IL11RAQ14626 422 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 OR8G1Q15617 311 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 C11orf87Q6NUJ2 197 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 D2HGDHQ8N465 521 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 FAAP24Q9BTP7 215 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 C12orf10Q9HB07 376 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 C4orf47A7E2U8 309 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 AADACP22760 399 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 TAS2R30P59541 319 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 RAB1AP62820 205 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 ZC3HAV1LQ96H79 300 aaKnown RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 RAB9BQ9NP90 201 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 THBS4P35443 961 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 BAXQ07812 192 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 HLXQ14774 488 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-216ENST00000639300 SLC17A5Q9NRA2 495 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
SCARB2-216ENST00000639300 CACNA1HO95180 2353 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF816-ZNF321PA0A0X1KG74 233 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 HLA-HP01893 362 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 HBE1P02100 147 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 AGFG1P52594 562 aaKnown RBP12.83□□□□□ -0.35
SCARB2-216ENST00000639300 SPANXN5Q5MJ07 72 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 ZFP82Q8N141 532 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 MALSU1Q96EH3 234 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 C14orf79Q96F83 325 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 SLC25A32Q9H2D1 315 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.35
SCARB2-216ENST00000639300 SHISA7A6NL88 538 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 SSSCA1O60232 199 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 ADRB1P08588 477 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 EFNB2P52799 333 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 CLLU1Q5K131 121 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 FAM122CQ6P4D5 195 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 OR10Z1Q8NGY1 313 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 UQCC2Q9BRT2 126 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 SARGQ9BW04 601 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 RTL8AQ9BWD3 113 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 NKX6-2Q9C056 277 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-216ENST00000639300 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-216ENST00000639300 B3GAT1Q9P2W7 334 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 ST6GALNAC2Q9UJ37 374 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 MTCH2Q9Y6C9 303 aa12.83□□□□□ -0.36
SCARB2-216ENST00000639300 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms